Protein Alignment Atg18b and atg1802

DIOPT Version :10

• Sequence 1: NP_610100.1
• Gene: Atg18b / 35396
• FlyBaseID: FBgn0032935
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_593843.1
• Gene: atg1802 / 2543297
• PomBaseID: SPAC823.16C
• Length: 335
• Species: Schizosaccharomyces pombe
• Alignment Length: 362
• Identity: 93/362 - (25%)
• Similarity: 164/362 - (45%)
• Gaps: 47/362 - (12%)

  Fly     7 NFNQDFTSLSVLSPTGLRLFSISSQDKVEEIFAKDNTEQIRIVERLFNSSLV--VLVTAQKPNCL 69
            ::|||...||:.|..|   :.:...:.....|:| ......|.|.|:.|||:  |.::.:....|
pombe     9 SWNQDRGFLSIGSENG---YQVYRSNPFTLCFSK-KANGASICEMLYESSLLAFVNISPESTRLL 69

  Fly    70 KMLHFKKKQDICNCFYPSEILCVRMNRQRLIVCLAESIHIHDIRDMKILHSIENIAPNEQGLCAL 134
            |::..|:...:|..||||.:|.||....||:|.:..||:::::::|::::::.....|   :.|.
pombe    70 KLVDIKRDIVLCRIFYPSPVLSVRFTWNRLVVLIKGSIYVYNLKNMELINTLNTSKGN---VIAF 131

  Fly   135 SLN-SHLAFPVCQTSGELRIFNASKLRTGMTIRAHDTSLSALAFSPSGALLATASERGTVIRVFC 198
            ::: :::|:......|::.:.:.........|..|.:::..:.|.|.|.|:||||.:||||||..
pombe   132 AVHENYVAYNSPTNPGDIYLASLDTAIPVTLIHCHSSAVQVVDFHPRGHLIATASAKGTVIRVIT 196

  Fly   199 VKNGQRVQEFRRGVSCVRIASLVFSASGDFLCASSNTETVHVFKIDTRAVETVELKAIADVAAKS 263
            ..:|:.|.|.|||.....|.|:.|.....||..:|...|:|||||                 :|.
pombe   197 TSDGELVTELRRGYIPASIVSISFHPVEPFLACASENGTIHVFKI-----------------SKQ 244

  Fly   264 ENSAKEAVASTAAEESCRPVASWGGMFSKAVSSLLLPTQVSEVLAQDRSFATVQLAQGGL--KHI 326
            .:....:..|:....|     ||         |..|.:.|::|....:.|||.::.:...  |.|
pombe   245 PSDPNSSPTSSVTVSS-----SW---------SKYLTSNVAKVWDTRKEFATAKIPEASFYGKII 295

  Fly   327 CALTRVQKEPRLLIACEDGFLYVHEFPAERGGPCKLM 363
            .:    ...|.:.:|...|..|......:.||.|.|:
pombe   296 FS----SSGPHIQVASYSGHYYRFAVNLKNGGNCALL 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Atg18b	NP_610100.1	WD40 repeat	79..122	CDD:293791	14/42 (33%)
		WD40 repeat	130..166	CDD:293791	3/36 (8%)
		WD40	<149..>251	CDD:441893	35/101 (35%)
		WD40 repeat	172..208	CDD:293791	16/35 (46%)
		WD40 repeat	212..257	CDD:293791	12/44 (27%)
atg1802	NP_593843.1	WD40 repeat	8..43	CDD:293791	9/37 (24%)
		WD40 repeat	47..86	CDD:293791	11/38 (29%)
		WD40	<56..242	CDD:441893	56/205 (27%)
		WD40 repeat	89..123	CDD:293791	9/33 (27%)
		WD40 repeat	127..165	CDD:293791	5/40 (13%)
		WD40 repeat	170..208	CDD:293791	17/37 (46%)
		WD40 repeat	216..246	CDD:293791	12/46 (26%)
		WD40 repeat	253..284	CDD:293791	11/44 (25%)