Sequence 1: | NP_001260667.1 | Gene: | Atg18b / 35396 | FlyBaseID: | FBgn0032935 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031748991.1 | Gene: | wipi2 / 100497399 | XenbaseID: | XB-GENE-6084294 | Length: | 435 | Species: | Xenopus tropicalis |
Alignment Length: | 392 | Identity: | 171/392 - (43%) |
---|---|---|---|
Similarity: | 232/392 - (59%) | Gaps: | 62/392 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 NFNQDFTSLSVLSPTGLRLFSISSQDKVEEIFAKDNTEQIRIVERLFNSSLVVLVTAQKPNCLKM 71
Fly 72 LHFKKKQDICNCFYPSEILCVRMNRQRLIVCLAESIHIHDIRDMKILHSIENIAPNEQGLCALSL 136
Fly 137 NS---HLAFPVCQTSGELRIFNASKLRTGMTIRAHDTSLSALAFSPSGALLATASERGTVIRVFC 198
Fly 199 VKNGQRVQEFRRGVS-CVRIASLVFSASGDFLCASSNTETVHVFKIDTRAVETVELKAIADVAAK 262
Fly 263 SENSAKEAVASTAAEESCRPVASWGGMFSKAV--SSLLLPTQVSEVLAQDRSFATVQLAQGGLKH 325
Fly 326 ICA------------------LTRVQKE---------PRLLIACEDGFLYVHEFPAERGGPCKLM 363
Fly 364 SV 365 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Atg18b | NP_001260667.1 | WD40 | <9..281 | CDD:225201 | 137/275 (50%) |
WD40 repeat | 79..122 | CDD:293791 | 27/42 (64%) | ||
WD40 | <89..242 | CDD:295369 | 91/156 (58%) | ||
WD40 repeat | 130..166 | CDD:293791 | 15/38 (39%) | ||
WD40 repeat | 172..208 | CDD:293791 | 22/35 (63%) | ||
WD40 repeat | 212..257 | CDD:293791 | 22/45 (49%) | ||
wipi2 | XP_031748991.1 | WD40 | <21..272 | CDD:225201 | 137/279 (49%) |
WD40 repeat | 58..99 | CDD:293791 | 22/40 (55%) | ||
WD40 repeat | 144..181 | CDD:293791 | 13/36 (36%) | ||
WD40 repeat | 187..224 | CDD:293791 | 23/36 (64%) | ||
WD40 repeat | 231..259 | CDD:293791 | 18/27 (67%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1216824at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001466 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1186 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 3.010 |