DRSC/TRiP Functional Genomics Resources

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Protein Alignment clumsy and CG11155

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:892 Identity:317/892 - (35%)
Similarity:484/892 - (54%) Gaps:46/892 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FLLIALPVLADIDRSQFMVGSIFTSDKDESEI--AFRTAVDRAN---ILERNVELVPIVVYANTD 68
            ::::::.|:::.......||:|||.|:.||.|  ||:.|:.|.|   .|..|.:||..:.|...|
  Fly    27 YIILSILVISNALPPVIRVGAIFTEDERESSIESAFKYAIYRINKEKTLLPNTQLVYDIEYVPRD 91

  Fly    69 DSFIMEKMVCNLISQGVIAIFGPSTGSSSDIIASICDTLDIPHIVYDWIPNESIPDREHST--MT 131
            |||...|.||:.:..||.|||||:....:..:.|||:..|||||       |...|.|:::  .:
  Fly    92 DSFRTTKKVCSQLEAGVQAIFGPTDALLASHVQSICEAYDIPHI-------EGRIDLEYNSKEFS 149

  Fly   132 LNVHPDNLLLSQGLAEIVQSFAWRSFTVVYETDKELQQLQDILQVGEPISNPTT-----VKQLGP 191
            :|::|.:.||:....:|:....|....::||.|..|..|..        |:..|     ::|..|
  Fly   150 INLYPSHTLLTLAYRDIMVYLNWTKVAIIYEEDYGLFNLMH--------SSTETKAEMYIRQASP 206

  Fly   192 GDDHRPFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLGEYQSVFIPLLDTHSIDFGELSGV 256
             |.:|..|:.|:......:|:...|.::....:...:|:|............|..:.|..:....
  Fly   207 -DSYRQVLRAIRQKEIYKIIVDTNPSHIKSFFRSILQLQMNDHRYHYMFTTFDLETYDLEDFRYN 270

  Fly   257 EANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQMILLNDAVWLFSKGLTELGI 321
            ..|||..||:|........|::..::.:..........| .::::..|:.|:|:.|:.||..|.:
  Fly   271 SVNITAFRLVDVDSKRYLEVINQMQKLQHNGLDTINGSP-YIQTESALMFDSVYAFANGLHFLNL 334

  Fly   322 --FEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFNENGQRSFFTLRFMELNSDGFL 384
              .:.....:|.|...:.|..|..:...|.|...:..||.:.|.| |:|:.|.|..::|..:...
  Fly   335 DNHQNFYIKNLSCTSDQTWNDGISLYNQINAAITDGLTGTVQFVE-GRRNIFKLDILKLKQEKIQ 398

  Fly   385 DLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVSSRLGAPFLTLREPQEGEILTGNSRYEGYS 449
            .:..|.|.:|:::    .:........::|.|.:|.:|...|::.::|.:.   ||||.|:||:.
  Fly   399 KVGYWHPDDGVNI----SDPTAFYDSNIANITLVVMTREERPYVMVKEDKN---LTGNLRFEGFC 456

  Fly   450 IDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVD 514
            |||:..||..:.|:::..:.||..||.....|.:|:|||::|::..|||.:..:|:..:|...:|
  Fly   457 IDLLKAIATQVGFQYKIELVPDNMYGVYIPETNSWNGIVQELMERRADLAVASMTINYARESVID 521

  Fly   515 FTPPFMTLGISILFSKPPTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENPH 579
            ||.|||.|||.|||..|.:.||.||||::|.::::|:|:.:||:.:|..||.:||.:|.:|:|||
  Fly   522 FTKPFMNLGIGILFKVPTSQPTRLFSFMNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPH 586

  Fly   580 PC-KEPEEVENIWSIMNTTWLSIGSLMGQGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAF 643
            || ||.:.|||.:||.|:.|...|:.:.||..:.|||.|||:|.|.|:||.|::::|||||||||
  Fly   587 PCYKETDIVENQFSISNSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAF 651

  Fly   644 LTNSRQANSINSAEDLAAQSKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAMESASPSVFTKTNDE 708
            ||..|..:.|.||.|||.|::|.||.:.|||||.|||||....|||||..||:...:||.||.::
  Fly   652 LTVERMISPIESASDLAEQTEISYGTLEGGSTMTFFRDSKIGIYQKMWRYMENRKTAVFVKTYED 716

  Fly   709 GVERVQKGKNLYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISAAVLKLG 773
            |::||.:|.  ||||||||.|:|.|:|.|:|.||||.||.|.||||.|..||:|.:||.|:|:|.
  Fly   717 GIKRVMEGS--YAFLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIATPKGSPWRDKISLAILELQ 779

  Fly   774 ELGQLAELKRKWWKEMHGGGNCEKSDED-GGDTPELGLENVGGVFLVLGLGLLSAMVLGCTEFLW 837
            |.|.:..|..||||  :.|..|.:.|:. ......||:||:||||:||..||..|:|:...||.|
  Fly   780 EKGIIQILYDKWWK--NTGDVCNRDDKSKESKANALGVENIGGVFVVLLCGLALAVVVAIFEFCW 842

  Fly   838 NVKSVAIEEKISLKEAFKSEALFAARIWITTKPVHTSSESGSSNSSS 884
            |.:.....|..||......|..||.... .:|..|...:....|.||
  Fly   843 NSRKNLNTENQSLCSEMAEELRFAMHCH-GSKSRHRPRKRSCLNCSS 888

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377 102/383 (27%)
ANF_receptor 39..379 CDD:279440 90/353 (25%)
PBP2_iGluR_Kainate 414..787 CDD:270432 180/373 (48%)
Lig_chan 548..812 CDD:278489 133/265 (50%)
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377 102/383 (27%)
ANF_receptor 61..393 CDD:279440 89/349 (26%)
PBP2_iGluR_Kainate 424..793 CDD:270432 180/373 (48%)
Lig_chan 555..829 CDD:278489 141/277 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462690
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 1 0.900 - - OOG6_100167
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.750

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