DRSC/TRiP Functional Genomics Resources

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Protein Alignment clumsy and Ir92a

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_001097845.2 Gene:Ir92a / 42415 FlyBaseID:FBgn0038789 Length:678 Species:Drosophila melanogaster


Alignment Length:812 Identity:155/812 - (19%)
Similarity:263/812 - (32%) Gaps:278/812 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 LSQGLAEIV-QSFA-WRSFTVVYE-----TDKELQQLQDILQVGEPISNPTTVKQLGPGDDHRPF 198
            |||.|..|| |.|| :.|..:||.     |..:|:.|..:..|...:|.|..::.:...     |
  Fly    10 LSQLLRIIVGQYFAEFPSILIVYNNSASTTPLQLEYLSALELVLRELSKPIRLQWINVA-----F 69

  Fly   199 LKEIKLSTDNCLILHCAPDNLLKILQQANEL--KMLGEYQSVFIPLLDTHSIDFGELSGVEANIT 261
            ||::                        |:|  :::|...|                |..|..||
  Fly    70 LKDL------------------------NDLEDQVMGALNS----------------SVTEGFIT 94

  Fly   262 TVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQMILLNDAVWLFSKGLTELGIFEELT 326
            .:     |..|  :.:|         .||:     ..::..:.|.|..:||        :.|:.:
  Fly    95 IL-----SQTH--HFIH---------ARYY-----ATRNANVRLKDKRYLF--------LCEDES 130

  Fly   327 APDLECRRKKPWPFGKRIIEF------IKARSEETSTG-------------------RIDFNENG 366
            ..:|.|         ..|::|      ::..:|...||                   ..|..|.|
  Fly   131 PAELLC---------MDILQFYPHHLMVRPGTETAPTGPTGPHPDPRRGGGASVSTKNKDDGEGG 186

  Fly   367 QRSFFTLRFMELNSD----------GFLDLATWDPVNGLDVLNDDEESEKRV---GQKLSN---K 415
            ..:..|..:.::|.:          |.||...      ||....:|....||   ..||.|   :
  Fly   187 AGNKTTSPYRDINFELWTQKFVGAVGNLDALL------LDAFLPNETFANRVELYPNKLLNLQRR 245

  Fly   416 TFIVSSRLGAPF-LTLREPQ-EGEI-----------LTGNSRYEGYSIDLINEIAKMLNFKFEFR 467
            :.:|.|....|: :|...|. :|::           ||    ::|...:::....::.|......
  Fly   246 SLLVGSITYVPYTITNYVPAGQGDVDPIHPQWPNRSLT----FDGAEANVMKTFCQVHNCHLRVE 306

  Fly   468 MSPDGKYGALNKVTQTW---------DGIVRQLIDGNADLGI-C------DLTMTSS--RRQAVD 514
                 .|||.|     |         ||::..:.:...::.| |      .:|.||.  .|.:|.
  Fly   307 -----AYGADN-----WGGIYDNESSDGMLGDIYEQRVEMAIGCIYNWYDGITETSHTIARSSVT 361

  Fly   515 FTPPFMTLGISILFSKPPTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFAL------ARMAPD 573
            ...|            .|.|.....:.:.||:...|:.:.|..:.....|:.:      .|.:..
  Fly   362 ILGP------------APAPLPSWRTNIMPFNNRAWLVLISTLVICGTFLYFMKYVSYRLRYSGT 414

  Fly   574 DWENPHPCKEPEEVENIWSIMNTTWLSIGSLMGQGCDILPKAASTRLVTGMWWFFALMML----- 633
            ..:..|..|           :..:.|.|.:|..|    .|.|..:.......:|.|.::.     
  Fly   415 QVKFHHSRK-----------LEKSMLDIFALFIQ----QPSAPLSFDRFAPRFFLATILCATITL 464

  Fly   634 -NSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGA--MAGGSTMGFFRDSNFSTYQKM----- 690
             |.|:..|.:.||....:..:::.|.. |||..|:.|  :....|:   :.|:..|.|.:     
  Fly   465 ENIYSGQLKSMLTFPFYSAPVDTIEKW-AQSGWKWSAPSIIWVHTV---QSSDLETEQILARNFE 525

  Fly   691 ---WTAMESASPSVFTKTNDEGVERVQKGKNLYAFLMESTTLEYNVERKCDL-------VQIGGW 745
               ::.:.:.|   |......|:||:..|.......:.:..||..:....||       |.|.||
  Fly   526 VHDYSYLSNVS---FMPNYGFGIERLSSGSLSVGDYVSTEALENRIVLHDDLYFDYTRAVSIRGW 587

  Fly   746 LDYKSYGIAMPFNSPYRKQISAAVLKLGELGQLAELKRKWWKEMHGGGNCEKSDE------DG-- 802
                   |.||       :::..:....|.|    |...|..|.......:|..|      :|  
  Fly   588 -------ILMP-------ELNKHIRTCQETG----LYFHWELEFIDKYMDKKKQEVLMDLANGHK 634

  Fly   803 --GDTPELGLENVGGVFLVLGLGLLSAMVLGC 832
              |....|.:.|:.|...||..|:..|   ||
  Fly   635 VKGAPQALDVRNIAGALFVLAFGVAFA---GC 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377 54/298 (18%)
ANF_receptor 39..379 CDD:279440 50/271 (18%)
PBP2_iGluR_Kainate 414..787 CDD:270432 80/435 (18%)
Lig_chan 548..812 CDD:278489 56/302 (19%)
Ir92aNP_001097845.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462653
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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