DRSC/TRiP Functional Genomics Resources

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Protein Alignment clumsy and Ir85a

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_649833.1 Gene:Ir85a / 41052 FlyBaseID:FBgn0037630 Length:605 Species:Drosophila melanogaster


Alignment Length:390 Identity:72/390 - (18%)
Similarity:142/390 - (36%) Gaps:81/390 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   487 IVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFLSPFSLDVWI 551
            :.::.:|  ..:.|..|...:.|:|| :.|.......:.::..|..|.|| .::....|...|| 
  Fly   266 VAKEYVD--VAMNIRFLVPDTFRKQA-ESTVSHTRDDLCVIVPKAKTAPT-FWNIFRSFGSLVW- 325

  Fly   552 YMGSAYLFISLLLFALARMAPDDWENPHPCKEPEEVENIWSIMNTT-------WLSIGSL---MG 606
                |.:.:|:|                       |.|::..:..:       .|..|:|   |.
  Fly   326 ----ALILVSVL-----------------------VANVFCYILKSEVGRVPMQLFAGALTMPMT 363

  Fly   607 QGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMA 671
            |    :|...|.||....|.:|.|::.:::..||.:.:........||           :.||:|
  Fly   364 Q----IPPNHSIRLFLIFWLYFGLLICSAFKGNLTSMMVFQPYLPDIN-----------QLGALA 413

  Fly   672 GGSTMGFFRDSNFSTYQKMWT---AMESASPSVFTKTNDEGVERVQKGKNL-YAFLMESTTLEYN 732
            ........|..:....|...|   ..||.......:.:|..:..:.:..:: :|:|.:.....:.
  Fly   414 RSHYHIIIRPRHVKHIQHFLTLGHKHESRIREQMLEVSDTQMYEMMRNNDIRFAYLEKYHIARFQ 478

  Fly   733 VERKCDLVQIGGWLDYKSYGIAMPFN--------SPYRKQISAAVLKLGELGQLAELKRKWWKEM 789
            |..:..: .:|..|.:......:||:        |||...:.:.:....|.|    .:|.|.:.|
  Fly   479 VNSRVHM-HLGRPLFHLMNSCLVPFHAVYIVPYGSPYLGFLDSLIRSSHEFG----FERYWDRIM 538

  Fly   790 H------GGGNCEKSDEDGGDTP-ELGLENVGGVFLVLGLGLLSAMVLGCTEFLWNVKSVAIEEK 847
            :      |.....:....|.|.| .|.|::...||.:..:|:..|.::...|.|.:..::|:.::
  Fly   539 NSAFIKSGVKVVNRRRGSGNDEPVVLKLQHFHAVFALWLVGIGMACIVLAWEHLTHNYNLAVTKR 603

  Fly   848  847
              Fly   604  603

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377
ANF_receptor 39..379 CDD:279440
PBP2_iGluR_Kainate 414..787 CDD:270432 58/321 (18%)
Lig_chan 548..812 CDD:278489 53/292 (18%)
Ir85aNP_649833.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462649
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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