Protein Alignment clumsy and Ir76a

DIOPT Version :10

• Sequence 1: NP_001036373.1
• Gene: clumsy / 35394
• FlyBaseID: FBgn0026255
• Length: 1002
• Species: Drosophila melanogaster
• Sequence 2: NP_001097647.3
• Gene: Ir76a / 40157
• FlyBaseID: FBgn0260874
• Length: 646
• Species: Drosophila melanogaster
• Alignment Length: 544
• Identity: 111/544 - (20%)
• Similarity: 204/544 - (37%)
• Gaps: 117/544 - (21%)

  Fly   346 EFIKARSEETSTGRI----DFNENGQR-SFFTL-RFMELNSDGFLDLATWDPVNGLDVLNDDEES 404
            :::.:.:.|..|.|.    :||:|.:. .|:.| ||     |.....|||             |:
  Fly   164 QYLNSSTFEIKTNRFVGPRNFNKNPEPVEFYILQRF-----DAKGTKATW-------------ET 210

  Fly   405 EKRVGQKLSN---KTFIVSSRLGAPFLTL---REP--QEGEILTGNSRYEGYSIDLINEIAKMLN 461
            :..:..|:.|   :..::......||:.|   :.|  .:..:.|.:...:|..|.|:....::.|
  Fly   211 QSAMSSKMRNLKGREVVIGIFDYKPFMLLDYEKPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYN 275

  Fly   462 FKFEFRMSPDGKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISI 526
            ...:...|....:|.: .:..:..|:|..::|...|.|:..:.:.....:.:|.|......|::.
  Fly   276 CTIQVDTSEPYDWGDI-YLNASGYGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTC 339

  Fly   527 LFSKPPTPPTDLFSF---LSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENPHPCKEPEEVE 588
            |.    ..|..|.|:   |.||...:|:     .:.:.|||.:||......||:     ......
  Fly   340 LV----PAPNRLISWTLLLRPFQFVLWM-----CVMLCLLLESLALGITRRWEH-----SSVAAG 390

  Fly   589 NIWSIMNTTWLSIGSL---MGQGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQA 650
            |.| |.:..:..|.:|   :.|..:.:..:.:.|.|....:...:::...|:..|||.||.....
  Fly   391 NSW-ISSLRFGCISTLKLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLE 454

  Fly   651 NSINSAEDLAAQSKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAME--SASP-------------- 699
            .:.:|.:.|.....|..|                 |.|...|.::  ||.|
  Fly   455 EAADSRQRLFDHKLIWTG-----------------TSQAWITTIDERSADPVLLGLMEHYRVYDA 502

  Fly   700 ---SVFTKTNDEG--VERVQKGKNLYAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIA-MPFN 758
               |.|:.|...|  |||:|.|......|:|:..|: .::...|.:       |.::.:| :|..
  Fly   503 NLISAFSHTEQMGFVVERLQFGHLGNTELIENDALK-RLKLMVDDI-------YFAFTVAFVPRL 559

  Fly   759 SPYRKQISAAVLKLGELGQLAELKRKW-WK------EMHGGGN---CEKSDEDGGDTPELGLENV 813
            .|:....:..:|.....|    ..:.| ||      ..|....   .||::.|.|.. :||::|.
  Fly   560 WPHLNAYNDFILAWHSSG----FDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIGPV-KLGIDNF 619

  Fly   814 GGVFLVLGLGLLSAMVLGCTEFLW 837
            .|:.|:...|::.:::....| ||
  Fly   620 IGLILLWCFGMICSLLTFLGE-LW 642

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
clumsy	NP_001036373.1	PBP1_iGluR_Kainate	27..397	CDD:380605	14/56 (25%)
		PBP2_iGluR_Kainate	414..787	CDD:270432	79/409 (19%)
Ir76a	NP_001097647.3	None