DRSC/TRiP Functional Genomics Resources

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Protein Alignment clumsy and Ir75c

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_649013.3 Gene:Ir75c / 39983 FlyBaseID:FBgn0261401 Length:623 Species:Drosophila melanogaster


Alignment Length:739 Identity:152/739 - (20%)
Similarity:264/739 - (35%) Gaps:245/739 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 LKEIKLSTDNCLILHC--------------------------APDNLLKILQQ--ANELKMLGEY 235
            |.||.||  |.::.||                          .||||..:.::  .::|..||  
  Fly    14 LLEINLS--NLMVFHCWSIKEAFPLVEMLNQNGIFSQYIDVQNPDNLANVHKEYLDSDLVRLG-- 74

  Fly   236 QSVFIPLLDTHSIDFGELSGVEANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDP----- 295
              ||:.|    ..|..||  |....:..||.: .:.|.  :::|      ..|.:.|:..     
  Fly    75 --VFLDL----GCDKAEL--VTNQSSRARLYN-QNLHW--LLYD------EAGNFTKLTQLFEGA 122

  Fly   296 -----------NRVKSQMILLNDAVWLFSKGLTELGIFEELTAPD-LECRRKKPWPFGKRIIEFI 348
                       :|...:..:|:|   :::|| :.||....:|... |:|.|..     .::.|::
  Fly   123 NLSLNADVTYVSREDEERFILHD---VYNKG-SHLGGKLNITVDQTLQCNRSH-----CQVKEYL 178

  Fly   349 KARSEETSTGRIDFNENGQRSFFTLRFMELNSDGF--LDLATWDPVNG-----LDVLNDDEESEK 406
               ||.....|:...            |:|:|..|  ..|.:..|:|.     |:.||.|.:|..
  Fly   179 ---SELHLRPRLQHR------------MDLSSVTFRLAALVSVLPINSSEEELLEFLNSDRDSHM 228

  Fly   407 RVGQKLSNKTFIVSSRLGAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPD 471
            ....::.|:                                    ||....::|.||..:...  
  Fly   229 DSISRIGNR------------------------------------LIMHTQEILGFKLHYIWC-- 255

  Fly   472 GKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPT 536
            |.:    .|...:.|.:..|.:.:|:|  |              |.||:.....:.:..|.|...
  Fly   256 GTW----SVQDAFGGAIGMLTNESAEL--C--------------TTPFVPSWNRLHYLHPMTEQA 300

  Fly   537 DLFS----------------FLSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENPHPCKEPE 585
            ...:                ||.||...||      :.|..||:||...:    |...|      
  Fly   301 QFRAVCMFRTPHNAGIKAAVFLEPFMPSVW------FAFAGLLIFAGVLL----WMIFH------ 349

  Fly   586 EVENIW---------SIMNTTWLSIGSLMGQGCDILPKAASTRLVTGMWWFFALM-----MLNSY 636
             :|..|         |::::..:|.|:...||..::||:|..||.     |.|:|     |.|.|
  Fly   350 -LERHWMQRCLDFIPSLLSSCLISFGAACIQGSYLMPKSAGGRLA-----FIAVMLTSFLMYNYY 408

  Fly   637 TANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGGSTMGFF--------RDSNFSTYQKMWTA 693
            |:.:.:.|..|...::|.:.:.||..|     ...|..|:.|.        |....|.|::   .
  Fly   409 TSIVVSTLLGSPVRSNIRTIQQLADSS-----LDVGFDTVPFTKTYLVSSPRPDIRSLYKQ---K 465

  Fly   694 MES-ASPSVFTKTNDEGVERV--QKGKNLYAFLMESTTLEYNVERK------CDLVQIGGWLDYK 749
            :|| ..|:....:.:|||.||  |.|   :.:..|::.:.:.||:.      .||.:|....:..
  Fly   466 VESKRDPNSVWLSPEEGVIRVRDQPG---FVYTSEASFMYHFVEKHYLPREISDLNEIILRPESA 527

  Fly   750 SYGIAMPFNSPYRKQISAAVLKLGELGQLAELKRKWWK-EMHGGGNCEKSDEDGGDTPELGLENV 813
            .||: :..||.||:.::...:::.|.|..::..|.:.| ::|...|        ....::|:|..
  Fly   528 VYGM-VHLNSTYRQLLTQLQVRMLETGITSKQSRFFSKTKLHTFSN--------SFVIQVGMEYA 583

  Fly   814 GGVFLVLGLGLLSAMVLGCTEFLW 837
            ..:|:.|.:....|:::...|..|
  Fly   584 APLFISLLVAYFLALLILILEICW 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377 50/248 (20%)
ANF_receptor 39..379 CDD:279440 44/224 (20%)
PBP2_iGluR_Kainate 414..787 CDD:270432 87/419 (21%)
Lig_chan 548..812 CDD:278489 69/295 (23%)
Ir75cNP_649013.3 Lig_chan 328..553 CDD:306551 63/258 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462589
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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