DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment clumsy and Ir8a

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_727328.1 Gene:Ir8a / 31867 FlyBaseID:FBgn0052704 Length:936 Species:Drosophila melanogaster


Alignment Length:907 Identity:230/907 - (25%)
Similarity:377/907 - (41%) Gaps:241/907 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 YETD-----KELQQLQDILQVGEPISNPT-TVKQLGPGDDHRPFLKEIKLSTDNCLILHCAPDNL 219
            ::||     |||    |.|::...:.:.| |:.:...|.|.:.|          |.||.....:.
  Fly    34 FDTDIAMVLKEL----DALRLDVKVDDTTLTLTRSEDGLDMQRF----------CEILSTVGASA 84

  Fly   220 LKILQQA------NELKMLG----EYQSVFIPLLDTHSIDFGE-LSGVEANITTVRLMDPSD--- 270
            :..|..:      |.::.||    ..:.:..|.||.    ||: :....||...:..|:..|   
  Fly    85 VIDLTYSHWEEGYNLVRSLGIGYVRLERIMRPFLDM----FGDFMRQKRANNVAMVFMNARDAVE 145

  Fly   271 --------FHVKNVVHDWEEREKREGRYFKVDPNRVKSQMILLNDA---VWLFSKGLTELGIFEE 324
                    :..:.::.|..:.:  .|::|.   .|::|    |..|   :.||::.....||||:
  Fly   146 AMQQMLVGYPFRTLIMDASQTD--PGQHFL---ERIRS----LRPAPTYIALFARAAAMNGIFEK 201

  Fly   325 LTAPDLECRRKKPWPF-----GKRIIEFIKARSEETSTGRIDFNENG-QRSF----------FTL 373
            :...|| .:|...|.|     ..|:.::  .|..|..| |...|... .||.          ||:
  Fly   202 VQKADL-FQRPLEWHFVFLDTRDRVFKY--RRQAELCT-RFTLNPRAICRSMPMPDLYCGSGFTM 262

  Fly   374 -RFMELN-----------SDGF----------------------------LDLATW--------- 389
             |.|.||           |.|:                            ||:..|         
  Fly   263 QRAMLLNVLRSLINAAQVSPGYPLAIYQDCNATASSSEVSDPLEKDDYNWLDMVHWSNFLAYAPP 327

  Fly   390 ---------DPVNGL--------DVLNDDEESE------KRVGQ-KLSNKT-------FIVSSRL 423
                     .||.||        ...:.:.|::      ..||: :|.|:|       |.:.:..
  Fly   328 LPHIQDQFQSPVPGLTFAVNISAGYYSSEHEAKTDLAAWSSVGEMRLLNETISPARRFFRIGTAE 392

  Fly   424 GAPFLTL-REPQEGEIL---TGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQTW 484
            ..|:..| ||...||::   :|...:|||.||.|..:::.|||:||......|..|.||::.: |
  Fly   393 SIPWSYLRREEGTGELIRDRSGLPIWEGYCIDFIIRLSQKLNFEFEIVAPEVGHMGELNELGE-W 456

  Fly   485 DGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFM-TLGISILFSKPPTPPTDLFSFLSPFSLD 548
            ||:|..|:.|..|..|..|.|.|.|.:.:||.||:. ..||||...| |...|.||.|::...|:
  Fly   457 DGVVGDLVRGETDFAIAALKMYSEREEVIDFLPPYYEQTGISIAIRK-PVRRTSLFKFMTVLRLE 520

  Fly   549 VWIYMGSAYLFISLLLFALARMAPDDWEN-----PHPCKEPEEVENIWSIMNTTWLSIGSLMGQG 608
            ||:.:.:|.:..:::::.:.:.:|....|     |:.|:|       :::..:.|.::.|...||
  Fly   521 VWLSIVAALVGTAIMIWFMDKYSPYSSRNNRQAYPYACRE-------FTLRESFWFALTSFTPQG 578

  Fly   609 CDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGG 673
            ....|||.|.|::...:|.|.::||.::|||||||||..|....:.|.|.||.||:|.|..:...
  Fly   579 GGEAPKAISGRMLVAAYWLFVVLMLATFTANLAAFLTVERMQTPVQSLEQLARQSRINYTVVKDS 643

  Fly   674 STMGFFRDSNFS--TYQKMW-----------------------------TAMESASPSVFTKTND 707
            .|..:|.:..|:  |..:||                             .|:.|:.|....|   
  Fly   644 DTHQYFVNMKFAEDTLYRMWKELALNASKDFKKFRIWDYPIKEQYGHILLAINSSQPVADAK--- 705

  Fly   708 EGVERVQKGKNL-YAFLMESTTLEYNVERKCDLVQIGGWLDYKSYGIAMPFNSPYRKQISAAVLK 771
            ||...|...:|. |||:.:|..::|.:.|.|:|.::|.....:.|.:|:...|....::|.|:|:
  Fly   706 EGFANVDAHENADYAFIHDSAEIKYEITRNCNLTEVGEVFAEQPYAVAVQQGSHLGDELSYAILE 770

  Fly   772 LGELGQLAELKRKWWKEMHGGGNCEKSDEDGGDTPELGLENVGGVFLVLGLGL-LSAMVLGCTEF 835
            |.:.....|||.|:|.:.: ..||..|::..|.|    ||::||||:....|| |:.|.||....
  Fly   771 LQKDRFFEELKAKYWNQSN-LPNCPLSEDQEGIT----LESLGGVFIATLFGLVLAMMTLGMEVL 830

  Fly   836 LWNVKSVAIEEKISLKEAFKSEALFAARIWIT-TKPVHTSSESGSSNSSS--SSSSRSKHSF 894
            .:..|..|:|                    || .:||:.||.||.::|::  :::|.:|.::
  Fly   831 YYKKKQNALE--------------------ITQVRPVNDSSGSGGNSSTAPPTATSTTKQAW 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377 69/347 (20%)
ANF_receptor 39..379 CDD:279440 58/265 (22%)
PBP2_iGluR_Kainate 414..787 CDD:270432 125/421 (30%)
Lig_chan 548..812 CDD:278489 80/300 (27%)
Ir8aNP_727328.1 PBP2_iGluR_putative 383..786 CDD:270435 123/414 (30%)
Lig_chan 520..818 CDD:278489 85/312 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 82 0.746 Domainoid score I2907
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 1 1.000 - - mtm1027
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
65.910

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