DRSC/TRiP Functional Genomics Resources

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Protein Alignment clumsy and Ir7g

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_001368933.1 Gene:Ir7g / 31694 FlyBaseID:FBgn0029968 Length:607 Species:Drosophila melanogaster


Alignment Length:279 Identity:64/279 - (22%)
Similarity:110/279 - (39%) Gaps:51/279 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   412 LSNKTFIVSSRLGAPFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGA 476
            |:....||.:|..:|||.|.|        |.....|....|:.|:::.:||..:|    .|....
  Fly   209 LNGCPLIVLARKVSPFLDLDE--------GQRELRGLEGRLLQELSRRMNFSIQF----SGLQDQ 261

  Fly   477 L-NKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQ---AVDFTPPF-----MTLGISILFSKPP 532
            | |:.|.|...::::|:...    |..|.:...|::   |.:.||.|     ..:|..:|.:...
  Fly   262 LKNRTTWTEKQLLQKLVQER----IAHLAIGYVRKRIQYATNLTPVFPHYSNRVVGCLLLNAHNL 322

  Fly   533 TPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENPHPCKEPEEVENIWSIMNTT 597
            | ..:::||  ||....||.:..::|.||.|.....|.|.|               .:..::...
  Fly   323 T-SLEIWSF--PFQALTWICLVFSFLSISCLALLHXRGAGD---------------RLALVLAVY 369

  Fly   598 WLSIGSLMGQGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQ 662
            ..|:|..:..     |:..|.:|:...|..|.|::.:.|:|.|...|..........:.:||...
  Fly   370 AASLGLPIDP-----PERPSLQLLFASWLIFGLIVRSMYSALLFFILRYHLHQRLPGNLQDLTHG 429

  Fly   663 SKIKYGAMAGGSTMGFFRD 681
            .   |.|:.|.:|:...|:
  Fly   430 D---YAAVMGRTTLQDLRE 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377
ANF_receptor 39..379 CDD:279440
PBP2_iGluR_Kainate 414..787 CDD:270432 63/277 (23%)
Lig_chan 548..812 CDD:278489 28/134 (21%)
Ir7gNP_001368933.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462652
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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