DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment clumsy and Ir7b

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_572410.2 Gene:Ir7b / 31690 FlyBaseID:FBgn0029965 Length:655 Species:Drosophila melanogaster


Alignment Length:547 Identity:106/547 - (19%)
Similarity:194/547 - (35%) Gaps:127/547 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   366 GQRSFFTLRFM----ELN--------SDGFLDLATWDP---VNGLDVLNDDEESEKRVGQKLSNK 415
            |:....||||:    .||        .|..| :.::.|   ::|..|::.:..:..:||.|....
  Fly   133 GEEMQATLRFLWRLSVLNVGVVLRPPGDHIL-MVSYFPFSALHGCQVISANVVNRYQVGTKRWAS 196

  Fly   416 TFIVSSRLG--------------APFLTLREPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEF 466
            .....|:||              .|:|..|.       .|:..:.|....|:..:|:.|||..  
  Fly   197 QDYFPSKLGNFYGCLLTCATWEDMPYLVWRP-------DGSGSFVGIEGALLQFMAENLNFTV-- 252

  Fly   467 RMSPDGKYGALNK--VTQTWD---GIVRQLIDGNADLGICDLTMTSSRRQAVDF---TPPFMTLG 523
                 |.|. :||  |..|:|   .|..::...:||..:.......|....:.:   |..||:..
  Fly   253 -----GLYW-MNKEEVLATFDESGRIFDEIFGHHADFSLGGFHFKPSAGSEIPYSQSTYYFMSHI 311

  Fly   524 ISILFSKPPTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENPHPCKEPEEVE 588
            :.:...:......:..||  ||:..:|..:|...:...|||..|.|     |.:.|........|
  Fly   312 MLVTNLQSAYSAYEKLSF--PFTPLLWRAIGLVLILACLLLMLLVR-----WRHHHELPRNPYYE 369

  Fly   589 NIWSIMNTTWLSIGSLMGQGCDILPKAASTRLVTGMWWFFALMMLNSYTANLAAFLTNSRQAN-- 651
            .:...|.      |:|..:.   :|:...:|||...|.|..|::.:.|.:.:...|....|.|  
  Fly   370 LLVLTMG------GNLEDRW---VPQRFPSRLVLLTWLFATLVLRSGYQSGMYQLLRQDTQRNPP 425

  Fly   652 ----------------SINSAEDLAAQSKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAMESASP- 699
                            .:|.|..||:..:::      ...:.:...|...::..:  |.:|.|. 
  Fly   426 QTISEVLAQHFTIQLAEVNEARILASLPELR------PEQLVYLEGSELQSFPAL--AQQSGSSA 482

  Fly   700 --SVFTKTNDEG----VERVQKGKNLYAFLMESTTLEYNVERKCDLVQI----------GGWLDY 748
              ::.|.....|    |..:.:..:|....:.:..|.:.|.|...||.:          .|:|::
  Fly   483 RVAILTPYEYFGYFRKVHPMSRRLHLVRERIYTQQLAFYVRRHSHLVGVLNKQIQHAHTHGFLEH 547

  Fly   749 KSYGIAMPFNSPYRKQISAAVLKLGELGQLAELKRKWWKEMHGGGNCEKSDEDGGDTP----ELG 809
            .:           |:.:||...|...:.::|.........:.|..:..:|:||....|    .|.
  Fly   548 WT-----------RQYVSAVDEKDESVARIASTSYSTLDGIDGDPSLSESEEDQQVAPVRQNVLS 601

  Fly   810 LENVGGVFLVLGLGLLSAMVLGCTEFL 836
            :..:..:|.::....|.|:|:...|.|
  Fly   602 MRELAALFWLILWANLGAVVVFVLELL 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377 11/44 (25%)
ANF_receptor 39..379 CDD:279440 5/16 (31%)
PBP2_iGluR_Kainate 414..787 CDD:270432 79/429 (18%)
Lig_chan 548..812 CDD:278489 54/302 (18%)
Ir7bNP_572410.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462682
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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