Sequence 1: | NP_001036373.1 | Gene: | clumsy / 35394 | FlyBaseID: | FBgn0026255 | Length: | 1002 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_036706.1 | Gene: | Grin2b / 24410 | RGDID: | 2738 | Length: | 1482 | Species: | Rattus norvegicus |
Alignment Length: | 1116 | Identity: | 249/1116 - (22%) |
---|---|---|---|
Similarity: | 442/1116 - (39%) | Gaps: | 279/1116 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 LLIALPVLADIDRSQ----------FMVGSIFTSDKDESEIAFRTAVDRANILERNVELVP---I 61
Fly 62 VVYANTDDSFIMEKMVCNLIS----QGVIAIFGPSTGSSSDIIASICDTLD----IPHIVYDWIP 118
Fly 119 NESIPDREHSTMTLNVHPDNLLLSQGLAEIVQSFAWRSFTVVYETDKELQQLQDIL-QVGEPISN 182
Fly 183 --------PTTVKQLGPGDDHRPFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLGEYQSVF 239
Fly 240 IPLLDTHSIDFGELSGVEANITTVRLMDPSDFHVKNVVHDWEEREKREGRYFKVDPNRVKSQMIL 304
Fly 305 LNDAVWLFSKGLTELGIFEELTAPDLECRRKKPWPFGKRIIE---FIKARSEETSTGR-IDFNEN 365
Fly 366 GQRSFFTLRFMELNSDGFLDLATWDPVNGLDVLNDDE-------------ESEKRVGQKLSNKTF 417
Fly 418 IVSSRLGAPFLTLRE-------------PQEGEILTGNSRYE----------GYSIDLINEIAKM 459
Fly 460 LNFKFEFRMSPDGKYGALNKVTQTWDGIVRQLIDGNADLGICDLTMTSSRRQAVDFTPPFMTLGI 524
Fly 525 SILFSKP--PTPPTDLFSFLSPFSLDVWIYMGSAYLFISLLLFALARMAPDDWENP---HPC--- 581
Fly 582 -KEPEEVENIWSIMNTTWLSIGSLMGQGCDIL-PKAASTRLVTGMWWFFALMMLNSYTANLAAFL 644
Fly 645 TNSRQANSINSAEDLAAQ------SKIKYGAMAGGSTMGFFRDSNFSTYQKMWTAMESASPSVFT 703
Fly 704 KTNDEGVE----RVQKGKNLYAFLMESTTLEYNVERK--CDLVQIGGWLDYKS--YGIAMPFNSP 760
Fly 761 YRKQISAAVLKLGELGQLAELKRKWWKEMHGGGNCEKSDEDGGDTPELGLENVGGVFLVLGLGL- 824
Fly 825 LSAMVLGCTE-FLWN--------------------------VKSVAIEEKISLKEAFKSEALFAA 862
Fly 863 RIWITTKPVHTSSESGSSNSSSSSSSRSKHSFKSQGLSMKSLKSSGYQDVEASVHSKLKKIGSMF 927
Fly 928 SLKSQKTV----------TPPPEIGWKLDKSTQIDVVPTSDVDQELIPEVEPHL---------PH 973
Fly 974 RHHHHHHHRHH 984 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
clumsy | NP_001036373.1 | PBP1_iGluR_Kainate | 26..396 | CDD:107377 | 80/393 (20%) |
ANF_receptor | 39..379 | CDD:279440 | 71/363 (20%) | ||
PBP2_iGluR_Kainate | 414..787 | CDD:270432 | 113/419 (27%) | ||
Lig_chan | 548..812 | CDD:278489 | 75/285 (26%) | ||
Grin2b | NP_036706.1 | PBP1_iGluR_NMDA_NR2 | 33..393 | CDD:107373 | 81/417 (19%) |
PBP2_iGluR_NMDA_Nr2 | 403..803 | CDD:270436 | 117/435 (27%) | ||
HisJ | <459..>542 | CDD:223904 | 26/84 (31%) | ||
Lig_chan | 557..829 | CDD:278489 | 81/297 (27%) | ||
Pore-forming. /evidence=ECO:0000269|PubMed:24876489, ECO:0000305|PubMed:24876489 | 604..623 | 3/18 (17%) |