DRSC/TRiP Functional Genomics Resources

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Protein Alignment clumsy and F59E12.8

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:NP_001364714.1 Gene:F59E12.8 / 186629 WormBaseID:WBGene00019123 Length:379 Species:Caenorhabditis elegans


Alignment Length:421 Identity:78/421 - (18%)
Similarity:149/421 - (35%) Gaps:108/421 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 GNADLGICDLTMTSSRRQAVDFTPPFMTLGISILFSKPPTPPTDLFSFLSPFSLDVWIYMGSAYL 558
            |..|:......||:.|...:.||.|.......:.....|....|:.....|||..||:.:....|
 Worm     8 GRIDMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLFHPFSTTVWLLLSLTVL 72

  Fly   559 FISLLLFALARM---APDDWENPHPCKEPEEVEN-IWSIMNTTWLSIGSLMGQGCDILPKAAST- 618
            .::::.|.|..:   :..:.|:.:.|     ::| |:.::.:|:         ..:|.....|| 
 Worm    73 VVAIVFFILRFVEFKSTKETESSYEC-----IQNSIFQVLLSTF---------NLEIRVAKKSTF 123

  Fly   619 ---RLVTGMW---WFFALMMLNSYTANLAAFL--TNSRQANSINSAEDLAAQSKIKYGAMAGGST 675
               .|.:.:|   ||.  :.::.||:.|:..:  ::.||....|.           ||      .
 Worm   124 FAFHLFSTIWLLAWFH--VFIDFYTSELSGMMVVSDKRQVPFDNF-----------YG------F 169

  Fly   676 MGFFRDSNFSTYQKMWTAMESASPS-----VFTKTNDEGVERVQKGKNLYAFLMESTTLEYNVER 735
            :...|..|:    :::|......|.     ..:|.|....|.:.|....|..||:....|:...|
 Worm   170 IDHLRKGNY----RLFTPSADRIPECPHEITTSKCNAIFSEILSKHPPEYGDLMQLNDREFVSSR 230

  Fly   736 KCDLVQIGGWLDYKSYGIAMPFN-----------------------------SPYRKQISAAVLK 771
            |..||.. ||  |.:..|:..|:                             .||..:::..::|
 Worm   231 KIPLVGF-GW--YPAQRISSKFSIWTQELFHSDIWLIRDFPVCPAAYIVRPTFPYLDELNEMIIK 292

  Fly   772 LGELGQLAELKRKW---WKEMHGGGNCEKSDEDGGDTPELGLENVGGVFLVLGLG-------LLS 826
            :  |...:.:...:   :.|:...|...||        ...|..:..:||:..||       |::
 Worm   293 V--LPAFSRIDNHYTPAYPELTLTGKPSKS--------SFSLNQLSSIFLIHLLGAFVSTLFLIA 347

  Fly   827 AMVLGCTEFLWNVKSVAIEEKISLKEAFKSE 857
            .:|:.......|:.| .::.::...::.|.|
 Worm   348 ELVIAELTKRHNIDS-TLQTRLDNSKSLKME 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377
ANF_receptor 39..379 CDD:279440
PBP2_iGluR_Kainate 414..787 CDD:270432 63/342 (18%)
Lig_chan 548..812 CDD:278489 55/313 (18%)
F59E12.8NP_001364714.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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