DRSC/TRiP Functional Genomics Resources

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Protein Alignment clumsy and LOC100331381

DIOPT Version :9

Sequence 1:NP_001036373.1 Gene:clumsy / 35394 FlyBaseID:FBgn0026255 Length:1002 Species:Drosophila melanogaster
Sequence 2:XP_017207884.1 Gene:LOC100331381 / 100331381 -ID:- Length:1063 Species:Danio rerio


Alignment Length:941 Identity:306/941 - (32%)
Similarity:493/941 - (52%) Gaps:98/941 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 ALPVLADIDRSQFMVGSIFTSDKDESEIAFRTAVDRANILE------RNVELVPIVVYANTD--- 68
            |||.|.......|:|..:..:....|::...:||..|.||:      |...|...:...|.:   
Zfish     3 ALPALLLSIHLLFLVLLLTMAPSSHSQVPALSAVRMAAILDDQSACGRGERLALALARENINSLM 67

  Fly    69 ----------DSFIMEK--------MVCNLISQGVIAIFGP-STGSSSDIIASICDTLDIPHIVY 114
                      |.|.:::        .:|.::.:||:::.|| |:.:|...::.||...:||||..
Zfish    68 EGPARARVEVDIFELQRDSQYETTDTMCQILPKGVVSVIGPASSPASGSTVSHICGEKEIPHIKI 132

  Fly   115 DWIPNES--IPDREHSTMTLNVHPDNLLLSQGLAEIVQSFAWRSFTVVYETDKELQQLQDILQVG 177
            .  |.|:  :|....:::||  :|.|..||..:..|::||.:.:.:::....:.|.:|::::: .
Zfish   133 G--PEETPRLPYLRFASVTL--YPSNEDLSLAIGAILRSFGYPTASLICAKAECLLRLEELVR-H 192

  Fly   178 EPISNPT-TVKQLGPGDDHRPFLKEIKLSTDNCLILHCAPDNLLKILQQANELKMLGEYQSVFIP 241
            ..||..| :|:.|....|..|.||||:......:|:.......:.||::|:||.|...:....:.
Zfish   193 FLISRETLSVRMLDENLDPTPLLKEIRDDKVATIIIDANASVSILILKKASELGMTSAFYKYILT 257

  Fly   242 LLDTHSIDFGELSGVEANITTVRLMDPS-----DFHVKNVVHDWEEREKREGRYFKVDPNRVKSQ 301
            .:|...:...::...::||....:::.|     :| ::::...|     |||......|....|.
Zfish   258 TMDFPLLRLDDVVNDQSNIVGFSMLNNSHPFYLEF-IRSLNLSW-----REGCDLSPYPGPALSS 316

  Fly   302 MILLNDAVWLFSKGLTELGIFEELTAPDLECRRKKPWPFGKRIIEFIKARSEETSTGRIDFNENG 366
            .::. |||.:....:.||...:|:....|.|.....|..|..::.:::....:..|||::||..|
Zfish   317 ALMF-DAVHVVVGAVRELNRSQEIGVKPLSCTSSLIWQHGTSLMNYLRMVEYDGLTGRVEFNSKG 380

  Fly   367 QRSFFTLRFMELNSDGFLDLATWDPVNGLDVLNDDEESEKRVGQKLSNKTFIVSSRLGAPFLTLR 431
            ||:.:|||.:|....|..::..|...|.|.:  :....:....:.|:|||..|::.|..|::..:
Zfish   381 QRTNYTLRILEKFKGGHKEIGVWYSNNTLAM--NSTSLDINTSETLANKTLTVTTILENPYVMRK 443

  Fly   432 EPQEGEILTGNSRYEGYSIDLINEIAKMLNFKFEFRMSPDGKYGALNKVTQTWDGIVRQLIDGNA 496
            |..:.  ..|:.:|||:.:|::.|:|.:|.|.|..::..||.||| .:...:|.|:|.:||:..|
Zfish   444 ENYQD--FQGSDQYEGFCVDMLRELADILKFSFRIKLVDDGLYGA-PEPNGSWTGMVGELINRKA 505

  Fly   497 DLGICDLTMTSSRRQAVDFTPPFMTLGISILF-----SKPPTPPTDLFSFLSPFSLDVWIYMGSA 556
            ||.:...|:||.|.:.:||:.|||.||||||:     .||     ..||||.|||..||::|..|
Zfish   506 DLAVAGFTITSEREKVIDFSKPFMNLGISILYRVHIGRKP-----GYFSFLDPFSPAVWLFMLLA 565

  Fly   557 YLFISLLLFALARMAPDDWENPHPC--KEPEEVENIWSIMNTTWLSIGSLMGQGCDILPKAASTR 619
            ||.:|.:||..||::|.:|.||.||  :..:.:||.:::.|:.|..||..|.||.:|:|:|.|||
Zfish   566 YLAVSCVLFLAARLSPYEWYNPFPCWRERRDLLENQYTLGNSLWFPIGGFMQQGSEIMPRALSTR 630

  Fly   620 LVTGMWWFFALMMLNSYTANLAAFLTNSRQANSINSAEDLAAQSKIKYGAMAGGSTMGFFRDSNF 684
            .|:|:||.|.|::::|||||||||||..|....|.||||||.|:.|:||.:.|||||.||.:|.:
Zfish   631 CVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPIESAEDLADQTNIQYGTIQGGSTMTFFMNSRY 695

  Fly   685 STYQKMWTAMESASPSVFTKTNDEGVERVQKGKNLYAFLMESTTLEYNVERKCDLVQIGGWLDYK 749
            .|||:||..|.|..||||.|:.:||:.||...|  ||||:|||..||:....|:|.||||.||.|
Zfish   696 QTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSK--YAFLLESTMNEYHRRLNCNLTQIGGLLDTK 758

  Fly   750 SYGIAMPFNSPYRKQISAAVLKLGELGQLAELKRKWWKEMHGGGNCEKSDEDGGDTPELGLENVG 814
            .|||.||..||:|.:|:..:|:|.|..:|..|||:||:    ||.|.|  |:......||::|:|
Zfish   759 GYGIGMPLGSPFRDEITLGILQLQENNRLEILKRRWWE----GGKCLK--EEDHRAKGLGMDNIG 817

  Fly   815 GVFLVLGLGLLSAMVLGCTEFLWNVKSVAIEEKI-----------SLKEAFKSEALFAARIWITT 868
            |:|:||..||:.|:.:...||:|:.:..|..:::           ..:.:...|.:...|..|:.
Zfish   818 GIFVVLICGLIIAVFVAIMEFVWSTRRSAETDEVRPHPCPVRNHRHARVSVCQEMMTEFRNVISC 882

  Fly   869 KPVHTSSESGSSNSSSSSSSRSKHSFKSQGL 899
            |              .:|..|.:.:|.|||:
Zfish   883 K--------------KNSRLRRRRAFSSQGV 899

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
clumsyNP_001036373.1 PBP1_iGluR_Kainate 26..396 CDD:107377 93/405 (23%)
ANF_receptor 39..379 CDD:279440 88/375 (23%)
PBP2_iGluR_Kainate 414..787 CDD:270432 175/379 (46%)
Lig_chan 548..812 CDD:278489 129/265 (49%)
LOC100331381XP_017207884.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D60688at33208
OrthoFinder 1 1.000 - - FOG0000021
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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