DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31624 and pdlim7

DIOPT Version :10

Sequence 1:NP_724318.1 Gene:CG31624 / 35393 FlyBaseID:FBgn0051624 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_957134.2 Gene:pdlim7 / 393813 ZFINID:ZDB-GENE-040426-2092 Length:427 Species:Danio rerio


Alignment Length:170 Identity:64/170 - (37%)
Similarity:95/170 - (55%) Gaps:3/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            :|..|.:.|..|.:.|||::||||.|:|..|...:.:..|..:.|...|:||:..||:..||.||
Zfish   251 LCAACSKIIRGRYVVALGRSWHPEEFMCCQCKRLLDEGGFFEEKGSIYCSKCYDNRYSPNCAKCK 315

  Fly    71 KPILEKTICAMGERWHEACFCCGGACKKPLASQTFYERDGKPYCKQDYENLFAARCAKCEKPIT- 134
            |.|..:.:.|:...:|..||.| .|||.|:.:|.||..:|:|||::|||.:|..:|..|:..|. 
Zfish   316 KIITGEIMHALKMTYHVQCFLC-AACKLPIRNQAFYMEEGEPYCERDYEKMFGTKCHGCDFKIDA 379

  Fly   135 -DSAVLAMNVKWHRNCFQCNKCENPITSQTFTIDGDKPVC 173
             |..:.|:...||..||.|..|:..:..:||....|||:|
Zfish   380 GDRFLEALGYSWHDTCFVCAICQINLEGKTFYSKKDKPLC 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31624NP_724318.1 LIM 7..58 CDD:413332 18/50 (36%)
LIM 66..118 CDD:413332 22/51 (43%)
LIM 125..176 CDD:214528 17/51 (33%)
pdlim7NP_957134.2 PDZ_PDLIM-like 14..91 CDD:467235
DUF5585 <33..>250 CDD:465521
LIM1_Enigma 252..303 CDD:188836 18/50 (36%)
LIM2_Enigma 311..362 CDD:188840 22/51 (43%)
LIM3_Enigma 370..424 CDD:188842 17/50 (34%)
Blue background indicates that the domain is not in the aligned region.

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