DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG31624 and Pax

DIOPT Version :9

Sequence 1:	NP_001163031.1	Gene:	CG31624 / 35393	FlyBaseID:	FBgn0051624	Length:	178	Species:	Drosophila melanogaster
Sequence 2:	NP_001033913.1	Gene:	Pax / 35215	FlyBaseID:	FBgn0041789	Length:	581	Species:	Drosophila melanogaster

Alignment Length:	167	Identity:	63/167 - (37%)
Similarity:	94/167 - (56%)	Gaps:	1/167 - (0%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 CHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCKK 71
            |:.|::.|..::|||||||||||||.|:||.:::....|..:.|.|.|...:...::..||.|..
  Fly   348 CNACEKPIVGQVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSPRCAYCNG 412

  Fly    72 PILEKTICAMGERWHEACFCCGGACKKPLASQTFYERDGKPYCKQDYENLFAARCAKCEKPITDS 136
            .||:|.:.|:.:.||...|.| ..|.:....:.|:||||||||:.||..:||.:|..|.:.|.::
  Fly   413 AILDKCVTALDKTWHTEHFFC-AQCGQQFGEEGFHERDGKPYCRNDYFEMFAPKCNGCNRAIMEN 476

  Fly   137 AVLAMNVKWHRNCFQCNKCENPITSQTFTIDGDKPVC 173
            .:.|:|.:||.:||.|..|..|....:|......|.|
  Fly   477 YISALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYC 513

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG31624	NP_001163031.1	LIM	7..58	CDD:351770	23/50 (46%)
		LIM	66..118	CDD:351770	21/51 (41%)
		LIM	125..176	CDD:214528	15/49 (31%)
Pax	NP_001033913.1	LIM1_Paxillin_like	348..400	CDD:259830	23/51 (45%)
		LIM2_Paxillin_like	407..458	CDD:188723	21/51 (41%)
		LIM3_Paxillin_like	466..518	CDD:188724	15/48 (31%)
		LIM4_Paxillin	525..576	CDD:188795
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45453094
Domainoid	1	1.000	47	0.796	Domainoid score	I4515
eggNOG	1	0.900	-	-		E1_KOG1703
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D249616at33208
OrthoFinder	1	1.000	-	-		FOG0000055
OrthoInspector	1	1.000	-	-		otm47179
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X39
	8	7.750