DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG31624 and Fhl4

DIOPT Version :9

Sequence 1:	NP_001163031.1	Gene:	CG31624 / 35393	FlyBaseID:	FBgn0051624	Length:	178	Species:	Drosophila melanogaster
Sequence 2:	NP_001013190.2	Gene:	Fhl4 / 314678	RGDID:	1308978	Length:	280	Species:	Rattus norvegicus

Alignment Length:	175	Identity:	57/175 - (32%)
Similarity:	84/175 - (48%)	Gaps:	5/175 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly     6 VCHKCQEAI--TKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAG 68
            :|.:|.:.|  ..:.:....:.||...|.|..|.:.:...||.|...:.:||.|..::....|.|
  Rat    38 ICVECNKPIGADSKEVCYKERFWHNTCFKCSKCLQPLATETFVVWDNKILCNNCVSQQAFPKCKG 102

  Fly    69 CKKPIL--EKTICAMGERWHEACFCCGGACKKPLASQTFYERDGKPYCKQDYENLFAARCAKCEK 131
            |.|.|.  |:::...|..||:.||.|.. ||:.:.::||:.:|...||...|:.||...|.||.|
  Rat   103 CLKDIKQGEQSVEYKGTIWHKDCFVCSN-CKEVIGTKTFFPKDEGFYCVACYDILFTKYCVKCNK 166

  Fly   132 PITDSAVLAMNVKWHRNCFQCNKCENPITSQTFTIDGDKPVCPAC 176
            |||...|...:..||..||.|..|...::.|.||:..||..|..|
  Rat   167 PITSGGVSYQDQPWHSECFVCVNCSKELSEQRFTVMDDKIFCVDC 211

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG31624	NP_001163031.1	LIM	7..58	CDD:351770	13/52 (25%)
		LIM	66..118	CDD:351770	19/53 (36%)
		LIM	125..176	CDD:214528	20/50 (40%)
Fhl4	NP_001013190.2	LIM	39..91	CDD:413332	13/51 (25%)
		LIM	100..157	CDD:413332	20/57 (35%)
		LIM	161..213	CDD:413332	21/51 (41%)
		LIM	216..279	CDD:413332
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	56	1.000	Domainoid score	I10711
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	131	1.000	Inparanoid score	I4531
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000055
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X39
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	5	4.960