DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31624 and Pdlim7

DIOPT Version :10

Sequence 1:NP_724318.1 Gene:CG31624 / 35393 FlyBaseID:FBgn0051624 Length:178 Species:Drosophila melanogaster
Sequence 2:XP_038951356.1 Gene:Pdlim7 / 286908 RGDID:628769 Length:464 Species:Rattus norvegicus


Alignment Length:170 Identity:64/170 - (37%)
Similarity:93/170 - (54%) Gaps:3/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVERYTYTCAGCK 70
            |||:|.:.|..|.:.|||..:|||.|:|..|.:.:.:..|..:.|...|..|:..||..:||.||
  Rat   288 VCHQCHKIIRGRYLVALGHAYHPEEFVCSQCGKVLEEGGFFEEKGAIFCPSCYDVRYAPSCAKCK 352

  Fly    71 KPILEKTICAMGERWHEACFCCGGACKKPLASQTFYERDGKPYCKQDYENLFAARCAKCEKPIT- 134
            |.|..:.:.|:...||..||.| .|||.|:.::.||..:|.|||::|||.:|..:|..|:..|. 
  Rat   353 KKITGEIMHALKMTWHVPCFTC-AACKTPIRNRAFYMEEGAPYCERDYEKMFGTKCRGCDFKIDA 416

  Fly   135 -DSAVLAMNVKWHRNCFQCNKCENPITSQTFTIDGDKPVC 173
             |..:.|:...||..||.|..|:..:..:||....|||:|
  Rat   417 GDRFLEALGFSWHDTCFVCAICQINLEGKTFYSKKDKPLC 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31624NP_724318.1 LIM 7..58 CDD:413332 17/50 (34%)
LIM 66..118 CDD:413332 22/51 (43%)
LIM 125..176 CDD:214528 17/51 (33%)
Pdlim7XP_038951356.1 PDZ_PDLIM-like 5..83 CDD:467235
PHA03247 <11..261 CDD:223021
DUF4749 <163..192 CDD:464948
LIM1_Enigma 289..340 CDD:188836 17/50 (34%)
LIM2_Enigma 348..399 CDD:188840 22/51 (43%)
LIM3_Enigma 407..461 CDD:188842 17/50 (34%)
Blue background indicates that the domain is not in the aligned region.

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