DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31624 and Pdlim2

DIOPT Version :9

Sequence 1:NP_001163031.1 Gene:CG31624 / 35393 FlyBaseID:FBgn0051624 Length:178 Species:Drosophila melanogaster
Sequence 2:NP_001240665.1 Gene:Pdlim2 / 213019 MGIID:2384850 Length:349 Species:Mus musculus


Alignment Length:45 Identity:13/45 - (28%)
Similarity:16/45 - (35%) Gaps:12/45 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 PEHFLCHHCDEQILDATFNVQSG---EPVCNKCFVERYTYTCAGC 69
            |:...|..|...|.:....:|.|   .|.|         ||||.|
Mouse   278 PKLHTCEKCSVNISNQAVRIQEGRYRHPGC---------YTCADC 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31624NP_001163031.1 LIM 7..58 CDD:351770 8/32 (25%)
LIM 66..118 CDD:351770 3/4 (75%)
LIM 125..176 CDD:214528
Pdlim2NP_001240665.1 PDZ_signaling 9..80 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..147
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..212
DUF4749 <198..252 CDD:406377
LIM_Mystique 283..335 CDD:188833 12/40 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1703
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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