DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mcm10 and MCM10

DIOPT Version :9

Sequence 1:NP_610097.2 Gene:Mcm10 / 35390 FlyBaseID:FBgn0032929 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_179694.2 Gene:MCM10 / 816632 AraportID:AT2G20980 Length:396 Species:Arabidopsis thaliana


Alignment Length:410 Identity:94/410 - (22%)
Similarity:164/410 - (40%) Gaps:90/410 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 TSTPQPLKNPHNPIKRQSAVSTTFQ---------RPPPVAAAVASTSQSSAPVSAVFTDPVFGLR 195
            ::.|..|.:..:|.:|..:..:.|:         .|.|:|........:::..:.:  :...|||
plant    27 SAAPGYLTDDESPKRRGHSDLSDFRSVVQDCIDYNPKPIAKNTKPKGSNNSNTNDI--EKFSGLR 89

  Fly   196 MINPLVSSSLLQERMTGRKPVPFSGVAY-------HIERGD-LAKDWVIAGALVSKNPVKNTKKG 252
            :.|.|:|.:.:.:.        ||.:.:       ::..|| |:..|...|.:..|...|.:..|
plant    90 IRNQLLSPAEISDL--------FSDIRFVRLPTIKNLLMGDKLSGCWATMGVITEKGQPKTSSIG 146

  Fly   253 DPYSTWKLSDLRGEVKTISLFLFKEAHKSLWKTAEGLCLAVLNPTIFERRAGSSDVACLSIDSSQ 317
            ..|..||:..|  ....:|||||.:|:|.......|....:.|.::  |:........||::|::
plant   147 QAYGIWKIGSL--NENNVSLFLFGDAYKKNETEKAGTVFGLFNCSL--RKDNGGREFSLSVNSAK 207

  Fly   318 KVMILGQSKDLGTCRATKKNGDKCTSVVNLTDCDYCIFHVKQEYGKM-SRRSELQSATAGRGINE 381
            :::.||.|.|.|.|.|.:|:|..||||||.....:|..|......|. :.|:||:          
plant   208 QMVKLGVSADYGVCTAKRKDGTTCTSVVNKRQGAFCKIHKLNASDKFATMRTELK---------- 262

  Fly   382 LRNKVLGKNEVFYGGQTFTAVPARKSAKLITKERDRLSMLAGYDVSPFAHTANHTSKPKTAEPTK 446
                         ||...||....||..:             |.|.|   .|:.:...||.:|.:
plant   263 -------------GGNLRTAFRDLKSQGI-------------YTVEP---PADRSGNKKTTQPVR 298

  Fly   447 IPYAERGGPVSRLAG------GVEASRKQRVQDLERLRLLKEENERFE------KKKQA---EGH 496
            :...|  |....|:|      .|.:...:.:.::.|.:..|..|::.|      :|::|   |..
plant   299 VLSVE--GLRKALSGADKVTPNVHSQGIRFLNEMARQKASKNVNKKSEAVNKSTEKRKASTKETQ 361

  Fly   497 VLGSDNKKESE--AGTPAVS 514
            |.|...:|::|  ..||.:|
plant   362 VNGEPKRKKTEHRKETPEIS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm10NP_610097.2 zf-primase 323..367 CDD:286419 17/44 (39%)
Mcm10 468..756 CDD:286422 14/58 (24%)
MCM10NP_179694.2 zf-primase 213..258 CDD:286419 17/44 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3056
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004424
OrthoInspector 1 1.000 - - oto2949
orthoMCL 1 0.900 - - OOG6_104520
Panther 1 1.100 - - LDO PTHR13454
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.810

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