DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcm10 and mcm10

DIOPT Version :10

Sequence 1:NP_610097.2 Gene:Mcm10 / 35390 FlyBaseID:FBgn0032929 Length:776 Species:Drosophila melanogaster
Sequence 2:NP_001016909.1 Gene:mcm10 / 549663 XenbaseID:XB-GENE-1015391 Length:845 Species:Xenopus tropicalis


Alignment Length:909 Identity:254/909 - (27%)
Similarity:393/909 - (43%) Gaps:239/909 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 SIDDEEEILALEKLLGAAENENTKSAESEKAKP-----------------------TAPILVPKL 53
            ::|.:.|:|.  .||...|...:.|.||.:|..                       |....|..:
 Frog     3 AVDADLELLT--SLLEENEAAESNSVESHEASSELDEYDELFDGDEDGSYHESDNGTEEQTVDGV 65

  Fly    54 RE--DNSFANA--FTFEKIVKPEKQKNAAIIKEPELDSSDDEEVKNFLERKYNEYGSDINKRLKQ 114
            .|  |..|.:.  ...|:.|.|:.:|.:::.::......:||                    |::
 Frog    66 EENFDTLFGDIDDINEEETVAPDTKKQSSVCQDKSKHELEDE--------------------LRK 110

  Fly   115 QQENAYESKVAREVDQELKKSIHVVTSTP-QPLKNPHN--------------------------- 151
            .||.      .|::.::|:::....||:| .|:|:|.|                           
 Frog   111 MQEQ------MRKLQKQLQQTALAKTSSPGNPMKSPDNKLLLSGKTFQSGPLLERSLTVPKANLQ 169

  Fly   152 -------------PIKRQSAVSTTFQRPPPVAAAVASTSQSSAPVSAVFTDPVF----------- 192
                         |:::|   .|:|..||        ...|:.|||:..|.||.           
 Frog   170 DTPKRKQNLQDKSPLQKQ---MTSFLSPP--------DKSSTRPVSSTATQPVLNPVRSPVGQQY 223

  Fly   193 ------GLRMINPLVSSSLLQERMTGRKPVPFSGVAYHIERGDLA-KDWVIAGALVSKNPVKNTK 250
                  |||:..|.||||.::.:|.|||.:..:.:...|....|. :|||..|.:|.|...:::.
 Frog   224 PVEKFSGLRLRKPRVSSSEMERKMNGRKLIRLAQLQNKIVTEKLEDEDWVTFGVIVKKITPQSSN 288

  Fly   251 KGDPYSTWKLSDLRGEVKTISLFLFKEAHKSLWKTAEGLCLAVLNPTIFERRAGSSDVACLSIDS 315
            .|..:|.|:|:||:...|.:|||||.:.||..|||.:|..:.:||....:.:.|:.:| |||:|:
 Frog   289 NGKTFSIWRLNDLKNLDKYVSLFLFGDVHKEHWKTDQGTVIGLLNANPMKPKEGTDEV-CLSVDN 352

  Fly   316 SQKVMILGQSKDLGTCRATKKNGDKCTSVVNLTDCDYCIFHVKQEYGKM-SRRSELQSATAG--- 376
            .|||:::|.:.|||||:|.|||||.||.:|||.||:||.:||:.:|.|: |:|::|||:.:|   
 Frog   353 PQKVLLMGDAVDLGTCKARKKNGDPCTQMVNLNDCEYCQYHVQAQYKKVSSKRADLQSSYSGHVP 417

  Fly   377 ----RGINELRNKVLGKNEVFYGGQTFTAVPARKSAKLITKERDRLSMLAGYDVSPFAHTANHTS 437
                ||.|.||.: |.::...|||                     :|.:|      :|.|...|:
 Frog   418 KKMARGGNGLRER-LCQDGFHYGG---------------------VSSMA------YATTLASTT 454

  Fly   438 KP-KTAEPTKIPYAERGGPVSRLAG--GVEASRKQRVQDLE-----------RLRLLK------- 481
            .| ||.:.|......||.....|..  .:.|:||..||..|           .|.|.|       
 Frog   455 APKKTVQSTLSNMVVRGAEAIALEARQQIAAARKNMVQSDEFKELMTLPTPGALNLKKHFSGVPT 519

  Fly   482 EENER----FEK------KKQAEGHVLGSDNKK-------------ESEAGTPAVSMPTTPVPDK 523
            :.||:    |:.      .||.:..:||:..|:             :||..:..||...:.....
 Frog   520 QANEKGGQPFQSISASALLKQQKQQMLGARKKRAEEIQKRFLESTEKSEKSSTLVSSERSVFQSP 584

  Fly   524 FKNRGF-SFDASLTPKL-----SGSENFSFEIN----VGSRQAQNAKLKAAALLKKK--PLEKIN 576
            .:...| :.....||||     .|.:...|:|:    ..:..||..||.|...|:.|  .|.|.:
 Frog   585 KQGAEFPNAQKMATPKLGRGFAEGEDVLFFDISPPAAKSNTSAQATKLAAIQKLQAKGQTLTKAD 649

  Fly   577 PNSTRGSESGKRRAIDELNEKFSSSAKRQKIDEDDRE-LMRKSR----------IEKIMAATSSH 630
            |||.:...|..  |.:.:.::.:|.|.......|:.| .|:|.|          .:||:.|.|.|
 Frog   650 PNSIKRKRSSS--AEELVAQRVASHAPASTKSPDENEPAMKKHREQLAYLESKEFQKILNAKSKH 712

  Fly   631 TNLVEMREREAQEEYFNKLERKEAMEEKMLTTYKMPCKAVICQVCKYTAFSASDRCKEQKHPLKV 695
            |.:::..|.|.||.||:.|.:||.:||||.:..:..|:.|.|:.||||.|...:.|..:.|....
 Frog   713 TGILKEAEAEIQERYFDPLVKKEQLEEKMRSIREQECRVVTCKTCKYTHFKPKETCVSENHDFHW 777

  Fly   696 VDAEKRFFQCKDCGNRTTTVFKLPKQSCKNCKGSRWQRTAMIREKKILTG----RETLSVRGDE 755
            .:..||||:|. |||||.::.:|||:.|..|...:|:|..|::||   ||    .|||..||:|
 Frog   778 HNGVKRFFKCA-CGNRTISLDRLPKKHCSTCGLFKWERDGMLKEK---TGPKIAGETLLPRGEE 837

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcm10NP_610097.2 zf-primase 323..365 CDD:462758 25/42 (60%)
Mcm10 462..755 CDD:462760 106/360 (29%)
mcm10NP_001016909.1 N-terminal domain. /evidence=ECO:0000250 1..145 33/169 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 15..65 8/49 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..218 31/176 (18%)
OB-fold domain. /evidence=ECO:0000250 217..367 52/150 (35%)
zf-primase 360..405 CDD:462758 26/44 (59%)
Zinc finger-like 1 368..393 16/24 (67%)
Mcm10 501..844 CDD:462760 101/343 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 564..586 4/21 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 643..688 11/46 (24%)
Zinc finger-like 2. /evidence=ECO:0000250 754..773 7/18 (39%)
Zinc finger-like 3. /evidence=ECO:0000250 787..807 10/20 (50%)

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