DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nbr and AT3G12470

DIOPT Version :10

Sequence 1:NP_610094.1 Gene:Nbr / 35385 FlyBaseID:FBgn0032924 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_566424.1 Gene:AT3G12470 / 820426 AraportID:AT3G12470 Length:220 Species:Arabidopsis thaliana


Alignment Length:180 Identity:37/180 - (20%)
Similarity:69/180 - (38%) Gaps:52/180 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   447 QLCV----LQIATGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLP 507
            ||||    |.|..|:| |.:..:.|..|.......:|  ::|..:                    
plant    79 QLCVGSRCLIIQLGYN-YGLPKVLRTFLADPKTTFVG--VWNGQD-------------------- 120

  Fly   508 LQLRLQMPHHYLDLRNLWLELK---KQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSN 569
             |.:|:...|.:::..| |:::   :...|..:.|.:.    :.:....|..:|.:|:.:...|:
plant   121 -QKKLEKCRHRVEIGKL-LDIRMFVRDSRGARMCFCSF----EQIVKERLGRVGVRLDPAICMSD 179

  Fly   570 WANRPLRREQILYAAIDARCLMLIYNTLIERVSFIQAVIEK----SIASN 615
            |....|...|:|.|:|::            .|.|..||.|:    .:|:|
plant   180 WGVYNLNHYQVLQASIES------------YVCFKLAVEERLWNLKVAAN 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NbrNP_610094.1 mut-7_like_exo 413..599 CDD:176655 30/158 (19%)
AT3G12470NP_566424.1 WRN_exo 31..206 CDD:176653 33/167 (20%)

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