DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nbr and AT3G12460

DIOPT Version :10

Sequence 1:NP_610094.1 Gene:Nbr / 35385 FlyBaseID:FBgn0032924 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_187852.1 Gene:AT3G12460 / 820425 AraportID:AT3G12460 Length:242 Species:Arabidopsis thaliana


Alignment Length:111 Identity:30/111 - (27%)
Similarity:48/111 - (43%) Gaps:13/111 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   491 VGFSMVSDLSVLQRSLPLQLRLQMPHHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLA 555
            ||.....|...|:||.. ||.:.   ..:|||....:...:|       ...|.:.:.:.:.:|.
plant   139 VGIWNSQDAGKLERSRH-QLEIA---ELMDLREFVSDSSGRR-------SMYNYSLEKIVEENLG 192

  Fly   556 CLGKKLNKSNQCSNWANRPLRREQILYAAID--ARCLMLIYNTLIE 599
            ..|.:|::....|:|....|..:|||.|:||  |.|.:.|.:.|.|
plant   193 YPGVRLDREVSMSDWRVYNLSYDQILQASIDVYACCSLAILDHLWE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NbrNP_610094.1 mut-7_like_exo 413..599 CDD:176655 29/109 (27%)
AT3G12460NP_187852.1 WRN_exo 31..238 CDD:176653 29/109 (27%)

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