DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nbr and AT3G12440

DIOPT Version :10

Sequence 1:NP_610094.1 Gene:Nbr / 35385 FlyBaseID:FBgn0032924 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_187850.1 Gene:AT3G12440 / 820423 AraportID:AT3G12440 Length:353 Species:Arabidopsis thaliana


Alignment Length:136 Identity:37/136 - (27%)
Similarity:59/136 - (43%) Gaps:17/136 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   451 LQIATGHNVYLIDCLARESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMP 515
            ||:..|:...:|.......:.....|.||     :.|...|||....|...|:||   :.||::.
plant   219 LQLCVGNRCIIIQLFYCNRVPHVLRRFLG-----DRNHTFVGFWNSQDAGKLKRS---RHRLEIA 275

  Fly   516 HHYLDLRNLWLELKKQRFGVELPFGNVNRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRREQI 580
             ..|||||..::.:.:        |...|:.:.:....|...|.:|.|:...|:|:...|..:||
plant   276 -ELLDLRNHVVDSRGR--------GLKGRSFEVVVGECLGYRGVRLEKAIGMSDWSVYDLSYDQI 331

  Fly   581 LYAAID 586
            |.|:||
plant   332 LQASID 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NbrNP_610094.1 mut-7_like_exo 413..599 CDD:176655 37/136 (27%)
AT3G12440NP_187850.1 Retinal <66..218 CDD:464722
WRN_exo 203..345 CDD:176653 37/136 (27%)
Blue background indicates that the domain is not in the aligned region.

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