DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nbr and Exd2

DIOPT Version :10

Sequence 1:NP_610094.1 Gene:Nbr / 35385 FlyBaseID:FBgn0032924 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_650075.1 Gene:Exd2 / 41374 FlyBaseID:FBgn0037901 Length:583 Species:Drosophila melanogaster


Alignment Length:230 Identity:51/230 - (22%)
Similarity:90/230 - (39%) Gaps:64/230 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   392 CPSSRCDMYLTMDLPDECLIIVNKADE------FDRMLYHLQQECVIYLDSEWMQSVCGDNQ-LC 449
            ||..|...:.:: :|...:.::|...:      .:.:..|.|...|:..|.||: :|.|..: :.
  Fly    35 CPLRRVWSFGSL-VPQRRIEVINSVQDPTTQWVLNELKNHCQTFKVLGFDCEWI-TVGGSRRPVA 97

  Fly   450 VLQIATGHNVYLIDCLAR-----ESLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQ 509
            :||:::...:..:..|..     :.||         .:..:.::.|||.:            |.:
  Fly    98 LLQLSSHRGLCALFRLCHMKQIPQDLR---------ELLEDDSVIKVGVA------------PQE 141

  Fly   510 LRLQMPHHY-------LDLRNLWLELKKQRFGVELPFGNVNRAG---DALTDLSLACLGKKLNKS 564
            ..:::.|.|       ||||.|.:                 .||   :.|..||...|...|:|.
  Fly   142 DAMKLSHDYGVGVASTLDLRFLCV-----------------MAGHKPEGLGKLSKTHLNYTLDKH 189

  Fly   565 NQ--CSNWANRPLRREQILYAAIDARCLMLIYNTL 597
            .:  ||||..:.|..:|:.|||.||...:.||..|
  Fly   190 WRLACSNWEAKTLEPKQLDYAANDALMAVAIYQKL 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NbrNP_610094.1 mut-7_like_exo 413..599 CDD:176655 47/209 (22%)
Exd2NP_650075.1 WRN_exo 62..226 CDD:176653 46/202 (23%)

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