DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nbr and Y57A10A.13

DIOPT Version :10

Sequence 1:NP_610094.1 Gene:Nbr / 35385 FlyBaseID:FBgn0032924 Length:625 Species:Drosophila melanogaster
Sequence 2:NP_496590.1 Gene:Y57A10A.13 / 174858 WormBaseID:WBGene00013256 Length:710 Species:Caenorhabditis elegans


Alignment Length:763 Identity:159/763 - (20%)
Similarity:242/763 - (31%) Gaps:329/763 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 GHQDPLLLALKIFANCPDSSNIKTKSLSHFVLDTVCKLH-------------KDFPHLGEGCDPN 139
            |..|....|.|:|...|      |..|....::.:.:.|             ..:||        
 Worm    41 GRFDFRQFAKKMFDPIP------TAQLGQLYIEMLEESHIYMHSHQKSRVGANGYPH-------- 91

  Fly   140 TSMIAFNFVKTSGLLALNNAVIHAYSLRQIRDLLLPKLRELLDNGLYKE---------------- 188
                  :||....|| ||  :|.||.|.|.|.:...|:.|  |.|..:|                
 Worm    92 ------SFVSVPELL-LN--MILAYQLPQQRFVPAEKMEE--DGGKVEEDGGAGGAGGSRKKRRN 145

  Fly   189 ---------------VTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYLDHATQQRLPFVKFL 238
                           |....::.:|..|  ||          |:|||.|.....|          
 Worm   146 SAARKGKNVTINPRVVLGNELAAKLLEE--ML----------KIPLAPESKQWKT---------- 188

  Fly   239 DSLLHKEKSVL--ELCEHLLDRY-----KNLK---ISHNVLSYRPMAKIVARLAKKYGFDDAVTP 293
                  .|.||  ..|...::.:     ||.|   ||.|.|:|.....|:.|.     .||.:| 
 Worm   189 ------AKYVLCPSSCPQQMEVFGEIIAKNTKSGLISFNALNYFMHDPILNRY-----LDDPIT- 241

  Fly   294 NYKFTKTCSYLHYLYREYEKTRMNLASFR-EVVSVHAFNHELRTDF-------VKYLASAGAHSE 350
                     .||.||         :...: ..|.:.|.|   |||.       |..:|...:...
 Worm   242 ---------ILHALY---------IGPLQAPTVELFATN---RTDVFRQRCREVLRIALHASKDP 285

  Fly   351 AIYWYT--EFNID---PKDCP----LEIETQVSQ--NGAGKAS-----GWESPGKERCPSSR--- 396
            ..:.|:  || ||   |..|.    :|..||:.:  ||..:.|     ||.....::....|   
 Worm   286 MTFTYSVPEF-IDKNHPDRCSYRDFVETVTQLIRDLNGEHQGSTAIHTGWACAAIKKFGQKRYVD 349

  Fly   397 --------CDMYLTM--------------------DLP-------------------DECLIIVN 414
                    .|:..|:                    ||.                   ::.:|||:
 Worm   350 KTWKDENYYDLIWTVLAQRPHLKKFVVDVLEKNFKDLDAARFWRRMQPYQMNPTVIFNQNVIIVD 414

  Fly   415 KADEFDRML--------------------------YHLQQECVIY--LDSEWMQSVCGDNQLCVL 451
            .....|..|                          |.:.:|..||  :|:||...| ..::..:|
 Worm   415 PLQPTDEFLNFPPTVRHIQMVTNEKEIRDLQMLLEYKVSREEKIYVGVDAEWSAYV-SPSKATIL 478

  Fly   452 QIATGHNVYLIDCLARE-SLRSEHWRLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQMP 515
            |::....:|:||..:.: |.:|.|..|  :.:|....|.|:||....||..|:.:....:.|..|
 Worm   479 QMSLHDCIYIIDLESYQISPQSYHHVL--SYLFETPEIVKIGFQFGEDLHQLRAAFRNCVALYRP 541

  Fly   516 HHYL--------------------DLRNLWL---------------------------------- 526
            ::.:                    |.|..||                                  
 Worm   542 NNVVCVGKLIMDLMDEIGKLENCDDFRKEWLPHLTDNETSSAANSSVEEQANETIDTNESMDEGD 606

  Fly   527 -----------ELKKQRFGVELPFGNVNRAGDALTDLSLAC---LGKKLNKSNQCSNWANRPLRR 577
                       |..||:|        :|:.      ||..|   ||:.|:|:.|||.|..||||.
 Worm   607 GGGSGIVVKKEESVKQQF--------LNKG------LSFICEKLLGRPLDKTEQCSVWDRRPLRC 657

  Fly   578 EQILYAAIDARCLMLIYNTLIERVSFIQAVIEKSIASNNFLRRGAHVK 625
            .|:.|||:||.|::|:|    |:.:.|.|.:  .|..|:|:.:.:.::
 Worm   658 LQLRYAAMDAYCMLLLY----EKCATIFAKL--GINVNDFVSKQSPIR 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NbrNP_610094.1 mut-7_like_exo 413..599 CDD:176655 63/282 (22%)
Y57A10A.13NP_496590.1 DnaQ_like_exo 432..677 CDD:447876 61/265 (23%)

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