DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nbr and exd3

DIOPT Version :10

Sequence 1:NP_610094.1 Gene:Nbr / 35385 FlyBaseID:FBgn0032924 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_003199355.3 Gene:exd3 / 100538036 ZFINID:ZDB-GENE-091204-349 Length:861 Species:Danio rerio


Alignment Length:572 Identity:152/572 - (26%)
Similarity:249/572 - (43%) Gaps:76/572 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 MYSKKKSPHLRQEFGRALMGHQDPLLLALKIFANCPDSSNIKTKSLSHFVLDTVCKLHKDFPHLG 133
            ::|:|:...|||....:....|:||...|.|...|......|..:||..:|....:...      
Zfish    22 LWSRKEQDELRQALAGSFSQMQEPLSGLLDILEGCVTVQKPKPSTLSQLILSEFMRWRS------ 80

  Fly   134 EGCDPNTSMIAFNFVKTSGLLALNNAVIHAYS------------LRQIRDLLLPKLRELLDN--- 183
                 |...:|.:.:.....|.|....:...:            :.|::.|..|.|.|.:||   
Zfish    81 -----NNPQVALDMLDEEERLCLQRRALGLLTDSQPGFMEPLLEVYQLKTLKRPLLLEHVDNLHC 140

  Fly   184 -GLYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYLDH--ATQQRLPFVKFLDSLLHKE 245
             ..:||...:|:.::|..:.||.::..|||.::||.|||.|:.|  ..||||  |..|||....:
Zfish   141 CCCFKEALVFSVKMELQSDLDMEKMCVPLILLDKLSLAELYVRHHPDLQQRL--VSLLDSWCRPD 203

  Fly   246 KSVLELCEHLLDRYKNLKIS-HNVLSYRP--MAKIVARLAKKYGFDDAVTPNYKFTKTCSYLHYL 307
            .|.    :.|:.::..|.:| |:....:|  ::|.|.||.:|:..|..:.||..:.:....|.:|
Zfish   204 FST----QTLISQFPQLVLSKHHSDQIQPKLLSKHVFRLMEKFHIDPGLCPNSVYKRKSDSLRFL 264

  Fly   308 -YREYEKTRMNLASFRE-VVSVHAFNHELRTDFVKYLASAGAHSEAIYWYTEFNIDPKDCPLEIE 370
             |:.:.:..|:..::|: |.::...:.||:...|:.|....:...|..|...:.:.....|:.:.
Zfish   265 MYKTFVEKGMSEENWRDHVQAMIEGDLELQVQLVQLLVKHCSLKAAAQWSAHYKLPRNRLPIGVW 329

  Fly   371 TQV-----SQNGAGKASGWESPGKERCP-SSRCDMYLTMDLPDECLIIVNKADEFDRMLYH-LQQ 428
            .::     .|...|..||   |.:...| .|..:.|..:.||.|.:..|...:|.|:.... |:.
Zfish   330 DKIQSLSPQQLELGSVSG---PPESWAPLQSDQEKYYQLPLPRENVHFVETLEEVDKCREAVLKS 391

  Fly   429 ECVIYLDSEWMQ--SVCGDNQLCVLQIATGHNVYLID----CLARESLRSEHWRLLGANIFNNVN 487
            .||:.:|.||..  ......::.::|:|....|:|:|    .::..|...:..|.|    .::..
Zfish   392 GCVVGMDMEWRAGFGTVSSQRVALIQLAVQDQVFLLDLCAHAISHHSTTVDFIRAL----LSDKK 452

  Fly   488 IRKVGFSMVSDLSVL------QRSLPLQ----LRLQMPHHYLDLRNLWLELKKQRFGVELPFGNV 542
            |.|:|:.|..||..|      .|..|::    |.|.:.|.  :|:..||..|..| .||:..|..
Zfish   453 ILKLGYGMSGDLRSLVSTWPDLREEPMKMEGVLDLLLIHQ--ELQRCWLGNKGCR-SVEVSEGPA 514

  Fly   543 NRAGDALTDLSLACLGKKLNKSNQCSNWANRPLRREQILYAAIDARCLMLIY 594
            .:   .|:.|....|||.||||.|.|||..||||..|:.|||.||.||:.||
Zfish   515 EK---GLSLLVQQVLGKPLNKSEQLSNWERRPLRTSQLRYAAADAYCLLDIY 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NbrNP_610094.1 mut-7_like_exo 413..599 CDD:176655 64/199 (32%)
exd3XP_003199355.3 None

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