DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nbr and exd3

DIOPT Version :10

Sequence 1:NP_610094.1 Gene:Nbr / 35385 FlyBaseID:FBgn0032924 Length:625 Species:Drosophila melanogaster
Sequence 2:XP_031747378.1 Gene:exd3 / 100494579 XenbaseID:XB-GENE-6046956 Length:755 Species:Xenopus tropicalis


Alignment Length:592 Identity:139/592 - (23%)
Similarity:252/592 - (42%) Gaps:98/592 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 NMYSKKKSPHLRQEFGRALMGHQDPLLLALKIFANCPDSSNIKTKSLSHFVLDTVCKLHKDFPHL 132
            ::::||....:||..|:.:...::||:..|.:.   ..:|..|.|..|..||     :..:|...
 Frog    20 SLWAKKDVLQIRQVVGQLISTLEEPLVALLDLL---EVTSTWKGKGNSLAVL-----IANEFQQW 76

  Fly   133 GEGCDPNTSMI------------AFNFVKTSGLLALNNAVIHAYSLRQI-RDLLLPKLRELLDNG 184
            .: .:|:...:            |.:.|....||.|   :...|.:.:. |..||.::..|..:|
 Frog    77 LK-ANPDARQVKSGLRLRKLQGRALSLVSEGQLLDL---LSDMYRIAEADRAFLLGQVTHLHRSG 137

  Fly   185 LYKEVTQWSISLQLTHEFDMLELAFPLIAIEKLPLAEEYLDHATQQRLPFVKFLDSLLHKEKSVL 249
            .|||....:..|.|..:.|:.|:..||:.:|:..|.|.|:....:.:...|:.||.......:..
 Frog   138 KYKEAAIMATRLGLQPDLDLEEMCTPLLFMERFNLVEAYVADYRELQCRLVQMLDGWSASNFNAR 202

  Fly   250 ELCEHLLDRYKNL-KISHNVLSYRPMAKIVARLAKKYGFDDAVTPNYKFTKTCSYLHYL-YREYE 312
            ::..    :|..| .:..:.|:.:.::::..:|.::|..|..:..|....:....|.|| |:.:.
 Frog   203 KVSR----QYIGLPPVKPDKLNMKTLSRLAFKLLERYNLDPVLCTNLLNQRHLGTLKYLMYKRFV 263

  Fly   313 KTRMNLASFREVVSVHA-----FNHELRTDFVKY--LASAGAHSEAIYWYTEFNIDPKDCP---- 366
            :..|...::.:.|....     ...:|.|..|:|  .|:||.      |...|.:..:..|    
 Frog   264 EKSMTHENWTDHVQSTVGQSRWLQDQLITLLVRYSDCATAGR------WALHFGLPKETLPLAVA 322

  Fly   367 -----LEIETQVSQNGAGKASGWESPGKERCPSSRCDMYLTMDLPDECLIIVNKADEF----DRM 422
                 |.|:.|:|.|        |:...:  |.:|.:.:..:.:|.:.:..:..|.:.    :|:
 Frog   323 DSLEDLSIQDQLSAN--------ENVPDD--PQTRKEHFYQLPIPRDKIHFLRSAGDLSVCRERV 377

  Fly   423 LYHLQQECVIYLDSEW--MQSVCGDNQLCVLQIATGHNVYLIDCL----------ARESLRSEHW 475
            |...|   |:.:|.||  |....|...:.::|:|....|:|:|.|          ..:..|.|..
 Frog   378 LKDGQ---VVGVDMEWRPMFGGLGKQTVSLVQLALREEVFLLDLLQLNAPGAGANGTQRTREELI 439

  Fly   476 RLLGANIFNNVNIRKVGFSMVSDLSVLQRSLPLQLRLQ-MPHHYLDLRNLWLELKK-------QR 532
            |.: .::|....|.|:.:|::.|:..|:.:.|..|.|: .....|||..:..:|::       :|
 Frog   440 RFI-KDLFLCAAITKLSYSVLGDIQNLEATDPEFLGLEKQTRGILDLYTVHKQLQRVPHRPRGKR 503

  Fly   533 FGVEL----PFGNVNRAGDALTDLSLA---CLGKKLNKSNQCSNWANRPLRREQILYAAIDARCL 590
            ..|::    |......|..:...|||.   .|||.|:|:.|.|||..||||.:||||||.||.||
 Frog   504 EPVDVLADGPPSEDGLAPQSEKGLSLLVRDILGKPLDKTEQLSNWDKRPLREQQILYAAADAYCL 568

  Fly   591 MLIYNTL 597
            :.:|:.|
 Frog   569 LEVYDVL 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NbrNP_610094.1 mut-7_like_exo 413..599 CDD:176655 64/216 (30%)
exd3XP_031747378.1 DnaQ_like_exo 361..577 CDD:447876 64/219 (29%)
Mut7-C 636..>730 CDD:473177
Blue background indicates that the domain is not in the aligned region.

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