DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld3 and pld3

DIOPT Version :10

Sequence 1:NP_610093.1 Gene:Pld3 / 35384 FlyBaseID:FBgn0032923 Length:494 Species:Drosophila melanogaster
Sequence 2:XP_031746255.1 Gene:pld3 / 496432 XenbaseID:XB-GENE-1006824 Length:522 Species:Xenopus tropicalis


Alignment Length:406 Identity:197/406 - (48%)
Similarity:262/406 - (64%) Gaps:9/406 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 CNIQLVESIPIGLTYPDGSPRFLSTYEAWLELLESATTSLDIASFYWTLKAEDTPGVSDNSTRPG 149
            |...||||||.||.|...:....|.:::||.:|.||.:|:|||||||||..|||. ..:.|...|
 Frog   111 CRFVLVESIPEGLVYDANATINPSIFQSWLNILTSAKSSVDIASFYWTLTNEDTQ-TQEPSAHQG 174

  Fly   150 EDVFARLLANGNGGSRSPRIKIRIAQSEPSSGTPNLNTKLLASAGAAEVVSISFPKYFGSGVLHT 214
            |.:...||.....|     :.:|:|.:.|.|.....:...|..:| |:|..:..|| ...|||||
 Frog   175 ELILQELLNLKQRG-----VSVRVAVNPPDSPLRAKDISALKDSG-ADVRVVDLPK-LTDGVLHT 232

  Fly   215 KLWVVDNKHFYLGSANMDWRALTQVKEMGVLVQNCPELTHDVAKIFGEYWYLGNSESSRIPDWDW 279
            |.||||::|||:||||||||:||||||:|..:.||..|..|:.|||..||.||...::....|..
 Frog   233 KFWVVDSEHFYIGSANMDWRSLTQVKELGATIYNCSCLAEDLKKIFEAYWILGLPNATLPSPWPV 297

  Fly   280 RYATSYNLKHPMQLSVNKNTSIEGFLSSSPPPLSPSGRTDDLNAILNTINTAITYVNIAVMDYYP 344
            .|:|.||...|||:.:| :|:.:.::||||||||.:||||||.:|:|.|:.|..:|.|:||||.|
 Frog   298 NYSTPYNKDTPMQVMLN-STASQVYISSSPPPLSATGRTDDLQSIINIIDDAKKFVYISVMDYSP 361

  Fly   345 LIIYEKNHHYWPFIDDALRKAAVERGVAVKLLISWWKHSNPSEDRYLRSLQDLASKEDKIDIQIR 409
            ...:.....|||:||:.||||..||.|.|:||||.|::|.||...:||||..|.|.:...:|:::
 Frog   362 TEEFSHPRRYWPYIDNHLRKAVYERNVNVRLLISCWQNSRPSMFTFLRSLAALHSNKSHYNIEVK 426

  Fly   410 RFIVPTDSSQEKIPFGRVNHNKYMVTDRVAYIGTSNWSGDYFTDTAGIGLVLSETFETETTNTLR 474
            .|:||....|:|||:.||||||||||||||||||||||||||..|||..|::::|....|::|::
 Frog   427 IFVVPATEVQKKIPYARVNHNKYMVTDRVAYIGTSNWSGDYFIHTAGSALIVNQTQSVGTSDTIQ 491

  Fly   475 SDLRNVFERDWNSKYA 490
            ..|:.||||||||.|:
 Frog   492 MQLQAVFERDWNSNYS 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pld3NP_610093.1 PHA02820 89..493 CDD:222934 196/402 (49%)
pld3XP_031746255.1 PHA02820 107..507 CDD:222934 196/404 (49%)
PLDc_SF 321..507 CDD:472788 102/185 (55%)

Return to query results.
Submit another query.