DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pld3 and Pld4

DIOPT Version :10

Sequence 1:NP_610093.1 Gene:Pld3 / 35384 FlyBaseID:FBgn0032923 Length:494 Species:Drosophila melanogaster
Sequence 2:NP_849242.1 Gene:Pld4 / 104759 MGIID:2144765 Length:503 Species:Mus musculus


Alignment Length:509 Identity:186/509 - (36%)
Similarity:283/509 - (55%) Gaps:39/509 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KKLEDQESDVENANRTTVQNTATVQD----AGEGQRQAAGQQAGQMV-----TVSLFMLLFLGSS 60
            ||.|..|.      |..:|....|.|    .........|...|.:.     :|:|.:.|:.|::
Mouse     3 KKKEHPEM------RIPLQTAVEVSDWPCSTSHDPHSGLGMVLGMLAVLGLSSVTLILFLWQGAT 61

  Fly    61 YFQPRPRLHQ------YKGGRGHGLLEKFDCNIQLVESIPIGLTYPDGSPRFLSTYEAWLELLES 119
            .|.......:      ::..:|....:...|.:.||||||..|.:..|||......:|||:||::
Mouse    62 SFTSHRMFPEEVPSWSWETLKGDAEQQNNSCQLILVESIPEDLPFAAGSPTAQPLAQAWLQLLDT 126

  Fly   120 ATTSLDIASFYWTLKAEDTPGVSDNSTRPGEDV---FARLLANGNGGSRSPRIKIRIAQSEPSSG 181
            |..|:.|||:||:|...|. ||:|:|:|.||.:   |.:||..        .|.:.:|...|:..
Mouse   127 ARESVHIASYYWSLTGLDI-GVNDSSSRQGEALLQKFQQLLLR--------NISVVVATHSPTLA 182

  Fly   182 TPNLNTKLLASAGAAEVVSISFPKYFGSGVLHTKLWVVDNKHFYLGSANMDWRALTQVKEMGVLV 246
            ..:.:.::||:.| |::..:...:..| ||||:|.||||.:|.|:||||||||:||||||:|.::
Mouse   183 KTSTDLQVLAAHG-AQIRQVPMKQLTG-GVLHSKFWVVDGRHIYVGSANMDWRSLTQVKELGAII 245

  Fly   247 QNCPELTHDVAKIFGEYWYLGNSESSRIPDWDWRYATSYNLKHPMQLSVNKNTSIEGFLSSSPPP 311
            .||..|..|:.|.|..||.||..::.....|...:::..|..||::...: ......:.|:|||.
Mouse   246 YNCSNLAQDLEKTFQTYWVLGTPQAVLPKTWPRNFSSHINRFHPLRGPFD-GVPTTAYFSASPPS 309

  Fly   312 LSPSGRTDDLNAILNTINTAITYVNIAVMDYYPLIIYEKNHHYWPFIDDALRKAAVERGVAVKLL 376
            |.|.|||.||:|:|..:..|..::.::||:|:|...:..:..|||.:|:|||.||:.:||.|:||
Mouse   310 LCPHGRTRDLDAVLGVMEGARQFIYVSVMEYFPTTRFTHHARYWPVLDNALRAAALNKGVHVRLL 374

  Fly   377 ISWWKHSNPSEDRYLRSLQDLASKEDKIDIQIRRFIVPTDSSQEKIPFGRVNHNKYMVTDRVAYI 441
            :|.|.:::|:...||||||..::....|.:.::.||||. .:...|||.||||:|:||||:.||:
Mouse   375 VSCWFNTDPTMFAYLRSLQAFSNPSAGISVDVKVFIVPV-GNHSNIPFSRVNHSKFMVTDKTAYV 438

  Fly   442 GTSNWSGDYFTDTAGIGLVLSETFETET--TNTLRSDLRNVFERDWNSKYATPL 493
            ||||||.|||:.|||:||::|:......  ..|::..||.:|||||:|.||..|
Mouse   439 GTSNWSEDYFSHTAGVGLIVSQKTPRAQPGATTVQEQLRQLFERDWSSHYAMDL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pld3NP_610093.1 PHA02820 89..493 CDD:222934 168/408 (41%)
Pld4NP_849242.1 PHA02820 94..501 CDD:222934 169/412 (41%)
PLDc_SF 302..489 CDD:472788 84/187 (45%)

Return to query results.
Submit another query.