DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq3 and COQ3

DIOPT Version :9

Sequence 1:NP_610092.2 Gene:Coq3 / 35383 FlyBaseID:FBgn0032922 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_014545.2 Gene:COQ3 / 854057 SGDID:S000005456 Length:312 Species:Saccharomyces cerevisiae


Alignment Length:272 Identity:83/272 - (30%)
Similarity:126/272 - (46%) Gaps:65/272 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RHLLSCSIGRNSTRSSSTAKSLDAGTQKEVRHHENHASEWWNQNGTMGALHALNEIRVPFIRDGI 77
            :.|.:||  |.:.::.:..||.|| ::.||:|.:..|..||:.:|:...||.:|..|:.|::..:
Yeast    15 KQLSACS--RFAIQTQTRCKSTDA-SEDEVKHFQELAPTWWDTDGSQRILHKMNLTRLDFVQRTV 76

  Fly    78 VSRGTVK--------PGYVNTTKVLLGQ------------------------NILEVGCGGGLLT 110
              |..||        ||:  ..|..|.:                        ::|:||||||:|:
Yeast    77 --RNQVKIQNPEIFVPGF--NYKEFLPEYVCDNIQREMQESIETNLDKRPEVSVLDVGCGGGILS 137

  Fly   111 EHLARLG--AQVAGIDLGEKLIEAAREHLKCSSPELASNVVYKIEPVDQHAKANCEC-------- 165
            |.||||.  ..|.||||....|..|:||.| ..|.|             ..|.|.||        
Yeast   138 ESLARLKWVKNVQGIDLTRDCIMVAKEHAK-KDPML-------------EGKINYECKALEDVTG 188

  Fly   166 -YDAVIVSEVLEHVKDKVSLLEASVRSLKP-GGSIFITTLNKTIPSWFGGVLLSEYVLNLVPRGT 228
             :|.:...|:||||.....:|......|.| .|.:|::|:|:.:.|||..:.:.|.||.:||:||
Yeast   189 QFDIITCMEMLEHVDMPSEILRHCWSRLNPEKGILFLSTINRDLISWFTTIFMGENVLKIVPKGT 253

  Fly   229 HHWDKMISPLDV 240
            ||..|.|:..::
Yeast   254 HHLSKYINSKEI 265

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq3NP_610092.2 UbiG 41..297 CDD:273910 75/244 (31%)
Methyltransf_11 100..200 CDD:285453 39/111 (35%)
COQ3NP_014545.2 UbiG 40..305 CDD:273910 75/244 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343940
Domainoid 1 1.000 51 1.000 Domainoid score I2887
eggNOG 1 0.900 - - E1_COG2227
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9683
Inparanoid 1 1.050 109 1.000 Inparanoid score I1395
Isobase 1 0.950 - 0 Normalized mean entropy S2416
OMA 1 1.010 - - QHG63170
OrthoFinder 1 1.000 - - FOG0003214
OrthoInspector 1 1.000 - - oto99693
orthoMCL 1 0.900 - - OOG6_102172
Panther 1 1.100 - - LDO PTHR43464
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R233
SonicParanoid 1 1.000 - - X2172
TreeFam 1 0.960 - -
1615.740

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