DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq3 and CHLM

DIOPT Version :10

Sequence 1:NP_610092.2 Gene:Coq3 / 35383 FlyBaseID:FBgn0032922 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_001328344.1 Gene:CHLM / 828611 AraportID:AT4G25080 Length:326 Species:Arabidopsis thaliana


Alignment Length:291 Identity:62/291 - (21%)
Similarity:107/291 - (36%) Gaps:82/291 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ALLVSGKLRHLLS-CSIGRNSTRSSSTAKSLDAGTQKEVRHHENHAS-EWWNQNGTMGALHALNE 67
            |:|..|.:..|.: .|:.....|....|:.:..|.::.||.:.|... |.|.:  ..|....:|.
plant    69 AVLGGGSVAALAAMVSLTDPERRRKLQAEEVGGGDKEVVREYFNSTGFERWRK--IYGETDEVNR 131

  Fly    68 IRVPFIRDGIVSRGTVKPGYVNTT----------KVLLGQNILEVGCGGGLLTEHLARLGAQVAG 122
            ::    :|       ::.|:..|.          :.|.|..:.:.|||.|||:..||:.||.|:.
plant   132 VQ----KD-------IRLGHAKTVENTMLMLTEDRSLAGVTVCDAGCGTGLLSIPLAKEGAIVSA 185

  Fly   123 IDLGEKLIEAAREHLKCSSPELASNVVYKIEPVDQHAKANCECYDAVIVSEVLEHV-KDKVSLLE 186
            .|:...::..|....|.   :|.|..:.|.|..|..:...  .||.|:..:||.|. ::|...:.
plant   186 SDISAAMVAEAEMKAKA---QLPSENLPKFEVNDLESLTG--KYDTVVCLDVLIHYPQNKADGMI 245

  Fly   187 ASVRSLKPGGSIFITTLNKTIPSWFGGVLLSEYVLNLVPRGTHHWD--KMISPL----------- 238
            |.:.||..                      ...:|:..|: |.::|  |.|..|           
plant   246 AHLASLAE----------------------KRVILSFAPK-TFYYDILKRIGELFPGPSKATRAY 287

  Fly   239 -----DVQRILDTSKFISGFIFRLGYSLFSR 264
                 ||:|.|.          ::|:.:..|
plant   288 LHSEADVERALG----------KVGWKISKR 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq3NP_610092.2 AdoMet_MTases 41..297 CDD:473071 54/254 (21%)
CHLMNP_001328344.1 PLN02585 35..326 CDD:215319 62/291 (21%)

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