DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq3 and jhamt

DIOPT Version :9

Sequence 1:NP_610092.2 Gene:Coq3 / 35383 FlyBaseID:FBgn0032922 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_001285980.1 Gene:jhamt / 34977 FlyBaseID:FBgn0028841 Length:297 Species:Drosophila melanogaster


Alignment Length:184 Identity:40/184 - (21%)
Similarity:61/184 - (33%) Gaps:62/184 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 ILEVGCGGGLL----TEHLARLGAQVAGIDLGEKLIEAAREHLKCSSPELASNVVYKIEPVDQHA 159
            :|:||.|.|.:    .:.|..:..|:.|.|:..:::..|.:|             |:.|...:..
  Fly    39 LLDVGSGSGNVLMDFVKPLLPIRGQLVGTDISSQMVHYASKH-------------YQREERTRFQ 90

  Fly   160 KANCEC----------YDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIFITTLNKTIPSWFGGV 214
            ..:..|          :|.|.....|..|::....|......|||.|               |..
  Fly    91 VLDIGCERLPEELSGRFDHVTSFYCLHWVQNLKGALGNIYNLLKPEG---------------GDC 140

  Fly   215 LLSEYVLNLVPRGTHHWDKMISPLDVQRILDT----SKF---ISGFIFRLGYSL 261
            ||:....|.|             .:|.:||.|    |.|   :..||..|.|||
  Fly   141 LLAFLASNPV-------------YEVYKILKTNDKWSTFMQDVENFISPLHYSL 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq3NP_610092.2 UbiG 41..297 CDD:273910 40/184 (22%)
Methyltransf_11 100..200 CDD:285453 23/113 (20%)
jhamtNP_001285980.1 SmtA 6..230 CDD:223574 40/184 (22%)
Methyltransf_12 40..137 CDD:285454 22/109 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR43464
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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