DRSC/TRiP Functional Genomics Resources

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Protein Alignment Coq3 and Coq3

DIOPT Version :9

Sequence 1:NP_610092.2 Gene:Coq3 / 35383 FlyBaseID:FBgn0032922 Length:310 Species:Drosophila melanogaster
Sequence 2:NP_766275.1 Gene:Coq3 / 230027 MGIID:101813 Length:370 Species:Mus musculus


Alignment Length:305 Identity:111/305 - (36%)
Similarity:171/305 - (56%) Gaps:39/305 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RHLLSCSIGRNST------RSSSTAK-SLDAGTQKEVRHHENHASEWWNQNGTMGALHALNEIRV 70
            |..||| :.|..|      |..||:: ::|:   :||::.:..|..||::.|....||::|::||
Mouse    66 RMALSC-LSRVKTYRTPWKRLYSTSQTTVDS---REVKNFQALAHTWWDEYGKFAPLHSMNDLRV 126

  Fly    71 PFIRDGIV-SRGTVKPGYVNTTKVLLGQNILEVGCGGGLLTEHLARLGAQVAGIDLGEKLIEAAR 134
            |||||.:: :..:..||     |.|.|..||:||||||||||.|.||||.|.|||...:.|:.|:
Mouse   127 PFIRDNLLKTSASHHPG-----KPLSGMKILDVGCGGGLLTEPLGRLGASVVGIDPVAENIKIAQ 186

  Fly   135 EHLKCSSPELASNVVYKIEPVDQHAKANCECYDAVIVSEVLEHVKDKVSLLEASVRSLKPGGSIF 199
            .| |...|.|...:.||:..:::....:.||:|||:.|||:|||......::...:.||||||:|
Mouse   187 HH-KSFDPVLDKRIQYKVCSLEEAVDESAECFDAVVASEVVEHVSHLEMFIQCCYQVLKPGGSLF 250

  Fly   200 ITTLNKTIPSWFGGVLLSEYVLNLVPRGTHHWDKMISPLDVQRILDTSKFISGFIFRLGYSLFSR 264
            |||:|||..|:..|::.:|.:..:||:|||.|:|.:||..::.||:                   
Mouse   251 ITTVNKTQLSYALGIVFAEQIAGIVPKGTHTWEKFVSPEKLESILE------------------- 296

  Fly   265 SSAVNCQTVLVNGSTYDFWSNTWRWINNNQMCYALQAVKQAQREY 309
            .:.::.:||.  |..|:.:|..|.|..|..:.||..||:...:|:
Mouse   297 PNGLSVETVA--GLVYNPFSGYWHWSENTSLNYAAHAVRSRAQEH 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Coq3NP_610092.2 UbiG 41..297 CDD:273910 96/256 (38%)
Methyltransf_11 100..200 CDD:285453 45/99 (45%)
Coq3NP_766275.1 UbiG 97..327 CDD:273910 87/230 (38%)
Methyltransf_11 152..251 CDD:285453 45/98 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 336..370 9/27 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837716
Domainoid 1 1.000 91 1.000 Domainoid score I7722
eggNOG 1 0.900 - - E1_COG2227
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9683
Inparanoid 1 1.050 183 1.000 Inparanoid score I3944
Isobase 1 0.950 - 0 Normalized mean entropy S2416
OMA 1 1.010 - - QHG63170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003214
OrthoInspector 1 1.000 - - oto93742
orthoMCL 1 0.900 - - OOG6_102172
Panther 1 1.100 - - LDO PTHR43464
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R233
SonicParanoid 1 1.000 - - X2172
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.740

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