DRSC/TRiP Functional Genomics Resources

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Protein Alignment E2f2 and efl-2

DIOPT Version :9

Sequence 1:NP_001286115.1 Gene:E2f2 / 35381 FlyBaseID:FBgn0024371 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001122660.1 Gene:efl-2 / 174980 WormBaseID:WBGene00001162 Length:358 Species:Caenorhabditis elegans


Alignment Length:321 Identity:82/321 - (25%)
Similarity:140/321 - (43%) Gaps:71/321 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PVSMDTSPDPPTPIKSPSNSQSQSQPGQQRSVG----------SLVLLTQKFVDLVKANEGSIDL 98
            |.|:|....|      ..:.|.|.:.|...:.|          ||.|:||:|:.|.:.|| .::|
 Worm     3 PSSIDLGSIP------GGSEQQQHEDGAAAAAGSPKEVFRSQQSLGLITQRFMSLRQRNE-VLNL 60

  Fly    99 KAATKILDVQKRRIYDITNVLEGIGLIDKGRHCSLVRWRGGGFNNAKDQENYDLARSRTNHLKML 163
            ....|.|::.|||:||:.|||||:|.::|... :.:||.|.. ||:::|   :...:|...|:..
 Worm    61 NEVAKELNISKRRVYDVINVLEGLGYVEKVEK-NNIRWIGDN-NNSEEQ---NALEARVEMLRQQ 120

  Fly   164 EDDLDRQLEYAQRNLRYVMQDPSNRSYAYVTRDDLLDIFGDDSVFTIPNYDEEVDIKRNHYELAV 228
            |..|:..:..||..:....:||..|.|.||:::|:...       ..|| .:.:.:|.       
 Worm   121 EKLLELMIRDAQAIIELHFEDPIERPYNYVSKEDIRKT-------AEPN-TKSIIVKS------- 170

  Fly   229 SLDNGSAIDIRLVTNQGKSTTNPHDVDGFFDYHRLDTPSPSTSSHSSEDGNAPACAGNVITDEHG 293
            .||..|:.:|: ||:  .||:..||:        :........||:....|.|...|    ||..
 Worm   171 ELDTSSSFEIQ-VTD--PSTSGSHDM--------IVRNKNGVKSHALLFTNDPPEYG----DEED 220

  Fly   294 YSCNPGMKDEMKLLENELTAKIIFQNYLSGHSLRRFYPD---DPNL--ENPPLLQLNPPQE 349
                   :|::|.|.::       :.:.:..:||....:   ||..  .:|..::|..|:|
 Worm   221 -------EDDVKKLSSQ-------KRFETSEALRVTLAEMLTDPTTISSSPKHIKLEEPEE 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
E2f2NP_001286115.1 E2F_TDP 77..138 CDD:280479 26/60 (43%)
E2F_DD 159..>218 CDD:304549 14/58 (24%)
efl-2NP_001122660.1 E2F_TDP 37..99 CDD:367033 26/63 (41%)
coiled coil 105..140 CDD:271137 7/37 (19%)
E2F_DD 110..200 CDD:389902 26/115 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000356
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12081
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.010

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