DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pths and bel

DIOPT Version :10

Sequence 1:NP_610090.1 Gene:pths / 35379 FlyBaseID:FBgn0032919 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_001262379.1 Gene:bel / 45826 FlyBaseID:FBgn0263231 Length:801 Species:Drosophila melanogaster


Alignment Length:612 Identity:172/612 - (28%)
Similarity:273/612 - (44%) Gaps:145/612 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETSEDEQTQLQTSDEEEDL----------GSEEEQEDEDNNH----------------KEGDS-- 39
            :|:||.|.|.|.....:..          |||..|....|..                |||..  
  Fly   184 QTAEDGQAQQQQQPRNDRWQEPERPAGFDGSEGGQSAGGNRSYNNRGERGGGGYNSRWKEGGGSN 248

  Fly    40 -------------EAALSGEDDKGSEDDAAEEQKL------------TWKDLGLNEALCQACDEL 79
                         |..|.|..:.|...|..|:..:            ::.|:.|.|.:.......
  Fly   249 VDYTKLGARDERLEVELFGVGNTGINFDKYEDIPVEATGQNVPPNITSFDDVQLTEIIRNNVALA 313

  Fly    80 KWKAPSKIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLE--------NPQRY------ 130
            ::..|:.:|:.|||:.:.|:|::..|:||||||.||.:|||:.:.|        :.::|      
  Fly   314 RYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLVPILNQMYELGHVPPPQSTRQYSRRKQY 378

  Fly   131 -FALVLTPTRELAFQIGEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHL 194
             ..|||.||||||.||.|:.:.......::..|:.||.:...|..:|.:..|:|:||||||.|.:
  Fly   379 PLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQMRELDRGCHLIVATPGRLEDMI 443

  Fly   195 ENMKGFNLKAIKYLVMDEADRILNMDFEVELDKILKVL----PRERRTFLFSATMTKKVKKLQRA 255
            ...| ..|:.|::||:|||||:|:|.||.::.:|::.|    ..:|:|.:||||..|::::|...
  Fly   444 TRGK-VGLENIRFLVLDEADRMLDMGFEPQIRRIVEQLNMPPTGQRQTLMFSATFPKQIQELASD 507

  Fly   256 SLKDPVKVEVSNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELA-GNSF------MIFCST---- 309
            .|.:.:.:.|.....|.|.:.|:.|::....|..||:.:|:.:. |..:      :||..|    
  Fly   508 FLSNYIFLAVGRVGSTSENITQTILWVYEPDKRSYLLDLLSSIRDGPEYTKDSLTLIFVETKKGA 572

  Fly   310 ---------CNNTVKTALMLRALGLAAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLD 365
                     ||:.|.:             :||..:|.:|..||..|::.:..||::|.||:||||
  Fly   573 DSLEEFLYQCNHPVTS-------------IHGDRTQKEREEALRCFRSGDCPILVATAVAARGLD 624

  Fly   366 IPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITLVSQYDIELYQRIEHLLGKQLTLYKCEE 430
            ||||..|:|||:|:..::|:||:|||.|.|..|.|.:..::.:..:                |.:
  Fly   625 IPHVKHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNEKNRNI----------------CSD 673

  Fly   431 DEVMALQERVAEAQRTAKLELKDLEDTR--GGHKRGG--------------DTHDDSENFTGARK 479
                 |.|.:.|.::.....::|:...|  ||.||.|              |....|....|.|.
  Fly   674 -----LLELLIETKQEIPSFMEDMSSDRGHGGAKRAGRGGGGRYGGGFGSRDYRQSSGGGGGGRS 733

  Fly   480 RMKP-MGGTG-GGGRKSFGKKNWSKGK 504
            ...| .||:| |||..|:.....|.||
  Fly   734 GPPPRSGGSGSGGGGGSYRSNGNSYGK 760

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pthsNP_610090.1 SrmB 62..480 CDD:440279 141/472 (30%)
belNP_001262379.1 DEADc_DDX3 275..522 CDD:350809 78/247 (32%)
SF2_C_DEAD 527..663 CDD:350174 48/148 (32%)

Return to query results.
Submit another query.