DRSC/TRiP Functional Genomics Resources

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Protein Alignment pths and CG6418

DIOPT Version :10

Sequence 1:NP_610090.1 Gene:pths / 35379 FlyBaseID:FBgn0032919 Length:507 Species:Drosophila melanogaster
Sequence 2:NP_648413.1 Gene:CG6418 / 39218 FlyBaseID:FBgn0036104 Length:791 Species:Drosophila melanogaster


Alignment Length:549 Identity:176/549 - (32%)
Similarity:272/549 - (49%) Gaps:80/549 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ETSEDEQTQLQTSDEE-----EDLGSEEEQE-DEDNN-----------------HKEGDSEA--- 41
            :..:||::..:...|.     .|.||::|.| |||.|                 |.|.:.|.   
  Fly   167 DDEDDEESYYRYMKENPNAGLRDEGSDQEIEYDEDGNPIAPPKKKDIDPLPPIYHSEIEYEPFEK 231

  Fly    42 -ALSGEDDKGSEDDAAEEQ-------KLT----------WKDLGLNEALCQACDELKWKAPSKIQ 88
             ..:..||..:.||....:       |:|          :...|.:|.|.:|..:.::..|:.||
  Fly   232 NFYTQHDDIAALDDEQVRELRRTLGVKVTGPSPPKPVTSFGHFGFDEQLIKAVRKAEYTQPTPIQ 296

  Fly    89 REAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRY-----FALVLTPTRELAFQIGEQ 148
            .:|:|.||.|:|:||:|:||||||.||..|:|..:::..|..     ..|:|.|||||:.||..:
  Fly   297 AQAVPTALSGRDIIGIAKTGSGKTAAFIWPMLMHVMDQKQLKPGDGPIGLILAPTRELSLQIYNE 361

  Fly   149 FEALGS--GIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAIKYLVMD 211
            .:..|.  .:.:.||  .||.....|...|.:...||:|||||::| :..||..||:.:.:||:|
  Fly   362 AKKFGKVYNLNVVCC--YGGGSKWEQSKALEQGAEIIVATPGRMID-MVKMKATNLRRVTFLVLD 423

  Fly   212 EADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEVSNKYQTVEQLQ 276
            ||||:.:|.||.::..|...:..:|:..:||||..|::::|.|..|.|||::...:..:..:.:.
  Fly   424 EADRMFHMGFEPQVRSICNHVRPDRQCLMFSATFKKRIERLARDVLSDPVRIVQGDLNEANQDIT 488

  Fly   277 QS-YLF-IPVKYKDVYLVHILNELAGNSFMIFCS--TCNNTVKTALMLRALGLAAIPLHGQMSQN 337
            || |:| .|::..:..|.|::..|:..|.:||.:  ....||...|:::...  .:.|||.|.|.
  Fly   489 QSVYVFPNPLQKWNWLLCHLVKFLSEGSVLIFVTKKVDAETVSNNLLIKEYN--CLLLHGDMDQA 551

  Fly   338 KRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAIT 402
            .|...:.:||.|...||::||||:|||||||:..|||:|.....:.:.||:|||.|||..|.|.|
  Fly   552 DRNKVITQFKRKECDILVATDVAARGLDIPHIRNVVNYDTARDIETHTHRIGRTGRAGEKGNAYT 616

  Fly   403 LVSQYDIELYQRIEHLLGKQLTLYKCEEDEVMALQERVAEAQRTAKLELKDLEDTRGGHKRGGDT 467
            ||:..|.|.   ..||:.......:...|::|.|      |.:::.......:..:|  ||..:|
  Fly   617 LVTDKDKEF---AGHLVRNLEGADQLVPDDLMEL------AMKSSWFRSSRFKQGKG--KRPTNT 670

  Fly   468 HDDSENFTGARKRMKPMGGTGGGGRKSFG 496
            |      ||...|.|   |.||||..|.|
  Fly   671 H------TGLGYREK---GNGGGGYGSAG 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pthsNP_610090.1 SrmB 62..480 CDD:440279 147/438 (34%)
CG6418NP_648413.1 SrmB 269..634 CDD:440279 135/372 (36%)

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