DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dap160 and NOP4

DIOPT Version :9

Sequence 1:NP_001246118.1 Gene:Dap160 / 35378 FlyBaseID:FBgn0023388 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_015282.1 Gene:NOP4 / 856063 SGDID:S000005964 Length:685 Species:Saccharomyces cerevisiae


Alignment Length:629 Identity:109/629 - (17%)
Similarity:202/629 - (32%) Gaps:217/629 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 AVQAAQKRKYT----QVFNANDRTRSGYLTGSQARGVLVQSKLPQ----VTLAQIWTLSDIDGDG 242
            |:..|:|.|:.    :|..|..|.|      |:....:|:...|:    :|........|.||: 
Yeast    82 ALAKARKTKFNGHILRVDIAKRRDR------SKKTSEVVEKSTPESSEKITGQNNEDEDDADGE- 139

  Fly   243 RLNCDEFILAMFLCEKAMAGEKIPVTLPQEWV---PPNLRKIKSRPGSVSGVV---SRPGSQPAS 301
                          :..:.|:...:.....|.   |..|:||..|.|:|....   .|.|.....
Yeast   140 --------------DSMLKGKPKLIIRNMPWSCRDPVKLKKIFGRYGTVVEATIPRKRDGKLCGF 190

  Fly   302 RHASVSSQSGVGV---------VDADPTA-GLPGQNKRKENYVKGQAELDRRRKIMEDQQRKERE 356
            ...::...|...:         :|....| ....|..|.|:|.|.|.|::.:    :|.:....:
Yeast   191 AFVTMKKISNCRIALENTKDLKIDGRKVAVDFAVQKNRWEDYKKAQPEMNDK----DDNESGNED 251

  Fly   357 ERERKEREEADKREKARLEAERKQQEELERQLQRQRE--------IEMEKEEQR----------- 402
            ..|..:.||.:..|:.|...:..:.:|.:|:.|.:||        :..:..|:.           
Yeast   252 AEENHDDEEDENEEEDRQVDQASKNKESKRKAQNKREDFSVFVRNVPYDATEESLAPHFSKFGSV 316

  Fly   403 --------KRELEAKEAARKELEKQR-----------------------QQEW------------ 424
                    |....||..|....:.|.                       ..|:            
Yeast   317 KYALPVIDKSTGLAKGTAFVAFKDQYTYNECIKNAPAAGSTSLLIGDDVMPEYVYEGRVLSITPT 381

  Fly   425 ----EQARIAEMNAQKERE------------------QERVLK-----QKAHNTQLNVELSTLNE 462
                :..|:||.||.|.:|                  :.||::     ....||.:.:...:...
Yeast   382 LVREDAGRMAEKNAAKRKEALGKAPGEKDRRNLYLLNEGRVVEGSKMADLLTNTDMEIREKSYKL 446

  Fly   463 KIKEL----SQRICDTRAGVTNVKTVIDGMRTQRDTSMSEMSQ-------LKARIKEQN----AK 512
            ::::|    |..:..||..:.|:.      |...|.::..:::       .:.:.||::    .:
Yeast   447 RVEQLKKNPSLHLSMTRLAIRNLP------RAMNDKALKALARKAVVEFATEVKNKERHPLSKEE 505

  Fly   513 LLQLTQERAKW---------EAKSKASGAALGGENAQQEQLNAAFAHKQL-IINQIKDKVENISK 567
            :::.|:|:.|:         :.|.|.||..                 ||. :|.::|......|:
Yeast   506 IIRSTKEKYKFMGPDEIEAQKKKDKKSGVV-----------------KQAKVIMEVKGSTAGRSR 553

  Fly   568 -----EIESKKED------INTNDVQMSEL--------KAELSALITKCEDLYKEYDVQRTSVL- 612
                 |....|..      :|.:.|...|:        |.::...:.|...|..|:.::.::|: 
Yeast   554 GYGFVEFRDHKNALMGLRWLNCHAVTSDEILEGLNDDEKKQVDNDLGKGRRLCVEFAIENSNVVK 618

  Fly   613 ----ELKYNRKNETSVSSAWDTGSSSAWE------ETGTTVTDP 646
                :||..|...|...:. |||.....|      |..||.|:|
Yeast   619 RRREQLKQARTKRTRPDNE-DTGDVGESENKKPKKEEATTPTNP 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dap160NP_001246118.1 EH 7..101 CDD:197477
EH 18..83 CDD:238009
EH 184..279 CDD:197477 18/103 (17%)
EH 195..261 CDD:238009 11/73 (15%)
GBP_C <366..467 CDD:303769 25/189 (13%)
TACC 369..570 CDD:282818 47/319 (15%)
coiled coil 432..443 CDD:293879 4/28 (14%)
coiled coil 457..467 CDD:293879 0/9 (0%)
TBPIP <495..589 CDD:284512 20/133 (15%)
SH3_Intersectin_1 674..728 CDD:212770
SH3_Intersectin_3 779..830 CDD:212772
SH3_Intersectin_4 941..998 CDD:212773
SH3_Intersectin_5 1025..1077 CDD:212774
NOP4NP_015282.1 RRM1_Nop4p 26..104 CDD:410075 6/21 (29%)
RRM2_Nop4p 147..229 CDD:410076 14/81 (17%)
RRM3_Nop4p 289..387 CDD:410077 7/97 (7%)
RRM4_Nop4p 458..620 CDD:410078 29/184 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0127
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.