DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dap160 and reps1

DIOPT Version :9

Sequence 1:NP_001246118.1 Gene:Dap160 / 35378 FlyBaseID:FBgn0023388 Length:1190 Species:Drosophila melanogaster
Sequence 2:XP_005160888.1 Gene:reps1 / 564535 ZFINID:ZDB-GENE-030131-9536 Length:791 Species:Danio rerio


Alignment Length:558 Identity:123/558 - (22%)
Similarity:200/558 - (35%) Gaps:147/558 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DAWAVTPRERLKYQEQFRALQPQ-AGFVTGAQAKGFFLQSQLPPLILGQIWALADTDSDGKMNIN 69
            |.|.:|..:|..|..||:.:|.. .|.:.|:.||.||.:|:||.|.|..||.|:|.|.||.:.::
Zfish   274 DPWKITDEQRQYYINQFKTIQADLTGLIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLD 338

  Fly    70 EFSIACKLINLKLRGMDVPKVLPPSLLSSLTGDVPSMTPRGSTSSLSPLDPLKGIVPAVAPVVPV 134
            ||..|..|:..:..|.|:|:.||.||:..|.                .||...| ||..||.|..
Zfish   339 EFCAAFHLVVARKNGYDLPEKLPESLMPKLI----------------DLDDSAG-VPEPAPEVGF 386

  Fly   135 VAPPVAVATVISPPGVSVPS--GPTPPTSNPPSRHTSISERAPSIESVNQGEWAVQAAQ------ 191
            .|.||.|....||   |:||  ...|..:....:..:.|||:.|.:::.|.:..:..|.      
Zfish   387 SASPVEVTPNKSP---SMPSLNQNWPELNQSNEQWETFSERSSSSQTLTQFDSNIAPADPDTAIV 448

  Fly   192 ---------KRKYTQVFNANDRTRSGYLTGSQARGVLVQSKLPQVT-----LAQIWTLSDIDGDG 242
                     .:.:.|..... ||.|.:...:..    :.:|.|:::     .|.|.......|||
Zfish   449 HPVPIRMTPSKIHMQEMELK-RTGSDHTHPTSP----LMTKPPELSDETKLAAAIKFPGTAVGDG 508

  Fly   243 RLNCDEFILAMFLCEKAMAGEKIPVTLPQEWVPPNLRKIKSRPG-SVSGV-VSRPGSQPASRHAS 305
            ..:.|.|                  |..||.:...:.:.:|..| |..|: |..|...|...|||
Zfish   509 YSSSDSF------------------TSDQEPISSAVNRQRSHSGTSPEGLKVVAPPPPPPRPHAS 555

  Fly   306 VSSQSGV-----------------GVVDADPTA---------------------GLPGQNKRKEN 332
            .|..|.:                 |||...|..                     |||........
Zfish   556 HSRSSSLDMNRNFAAVPAAGSQQAGVVAFPPAVPPRPLPTQTSVPHGHRSVEGDGLPAHTSTSPQ 620

  Fly   333 YVKGQ---AELDRRRKIMEDQQRKEREE-----------------RERKEREEADKREKARLEAE 377
            .:..|   |:..:.:....||...:.|.                 |..|...:|::|....:.:.
Zfish   621 QMPEQPNFADFSQFKAFAVDQPADDGENPSDGGQAERLPEAAGTMRTAKNDVQAEERNATTVNSA 685

  Fly   378 R------KQQEELERQLQRQREIEMEKEE--QRKRELEAKEAARKELEKQRQQEWEQARIAEMNA 434
            :      ...:.:.|:|:.:.|:..:.::  |:...:....|.:..:.:            .:..
Zfish   686 KVSTPLAPPPKPVRRRLKSEDELRPDVDDLPQKSNVIATVLATQPSIPR------------SLGK 738

  Fly   435 QKEREQERVLKQKAHNTQLNVELSTLNEKIKE-LSQRI 471
            .|:..|..:.:.|..||.|....|.|.:::|: |.:||
Zfish   739 DKKAIQASIRRNKETNTVLARLNSELQQQLKDLLEERI 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dap160NP_001246118.1 EH 7..101 CDD:197477 37/94 (39%)
EH 18..83 CDD:238009 26/65 (40%)
EH 184..279 CDD:197477 17/114 (15%)
EH 195..261 CDD:238009 13/70 (19%)
GBP_C <366..467 CDD:303769 16/109 (15%)
TACC 369..570 CDD:282818 18/112 (16%)
coiled coil 432..443 CDD:293879 2/10 (20%)
coiled coil 457..467 CDD:293879 3/10 (30%)
TBPIP <495..589 CDD:284512
SH3_Intersectin_1 674..728 CDD:212770
SH3_Intersectin_3 779..830 CDD:212772
SH3_Intersectin_4 941..998 CDD:212773
SH3_Intersectin_5 1025..1077 CDD:212774
reps1XP_005160888.1 EFh 14..81 CDD:298682
EH 275..366 CDD:197477 36/90 (40%)
EH 286..352 CDD:238009 26/65 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170589274
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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