DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dap160 and trip10a

DIOPT Version :9

Sequence 1:NP_001246118.1 Gene:Dap160 / 35378 FlyBaseID:FBgn0023388 Length:1190 Species:Drosophila melanogaster
Sequence 2:XP_017209563.1 Gene:trip10a / 492762 ZFINID:ZDB-GENE-041114-105 Length:592 Species:Danio rerio


Alignment Length:639 Identity:123/639 - (19%)
Similarity:220/639 - (34%) Gaps:190/639 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 SQSGVGVVDADPTAGLPGQNKRKENYVKGQAELDRR-RKIMEDQQRKEREERERKEREE------ 365
            :|||:.:||            :...:||.:.::::. .|.:.:..:|...:|..||.:|      
Zfish    18 TQSGLDLVD------------KYMKFVKERTDIEQNYAKQLRNLTKKYSPKRGSKEEQECRFSNH 70

  Fly   366 -------------ADKREKARLEAERKQQE---ELERQLQRQREIEMEKE---EQRKRELEAKEA 411
                         |.:||   |.||.....   ||.:.||   |::.|::   .:.|:..::.||
Zfish    71 QAFLDILNEMNDYAGQRE---LIAENMMINICVELNKYLQ---ELKQERKMHLSEAKKSQQSLEA 129

  Fly   412 ARKELE---KQRQQEWEQARIA---------EMNAQKEREQERVLKQKAH---------NTQLNV 455
            ..|:|:   |:.::||.:|..|         ::||.|...::  .||:||         .....|
Zfish   130 MYKQLDNSKKRFEREWREAEKAAQYADKTDQDLNATKADVEK--AKQQAHLRTHIAEDCKNDYAV 192

  Fly   456 ELSTLNEKIKELSQRICDTRAGVTNVKTVIDGMRTQRDTSMSEMSQLKARIKEQNAKLLQLTQER 520
            :|...|   ||.||..      .|::..:.:.::...:..:.:|:|......|....::.:.   
Zfish   193 QLQKYN---KEQSQFY------FTDMPQIFNKLQDMDERRIKKMAQGYILFAETERHVMPII--- 245

  Fly   521 AKWEAKSKASGAALGGENAQQEQLNAAFAHKQLIINQIKDKVENISK-EIESKKEDIN--TNDVQ 582
                      |..|.|.......:||. ....::|.|.|...|.... :.|...:.||  ::|..
Zfish   246 ----------GKCLEGMTRAGTNVNAR-NDSMVLIEQHKSGFERPGDLDFEDYSQGINRASSDSS 299

  Fly   583 MSELKAELSALITKCEDLYKEYDVQRTSVLELKYNRKNE--TSVSSAWDT---GSSSAWEETGTT 642
            :...|..|..|           ...:.....| :|:|::  :|..|.:.|   .|.:....:...
Zfish   300 LGTPKGPLELL-----------GKNKNKTFRL-FNKKSKLPSSSLSPYSTPPIPSPANGPPSPKF 352

  Fly   643 VTDPYAVASNDISALAAP-----------AVDLGG----------------------------PA 668
            ..||.:....:|:....|           .||..|                            ..
Zfish   353 GRDPLSYCLKEINKTVKPRISSFRTLKRTPVDTEGFTHLPPEQRRKRLQQKIDDMSKELQKEMDQ 417

  Fly   669 PEGFVKYQAVYEFNARNAEEITFVPGDIILVPLEQNAEPGWLAGEINGHTGWFPESYVEKLEVGE 733
            .|...|.:.|||.|.:..:..:..|.   :....||.:.  |.||:|.:..|..|:      .|.
Zfish   418 SEALGKMKDVYEKNPQMGDPASLAPQ---IGQTAQNMDR--LRGELNKYESWLAEA------GGR 471

  Fly   734 VAPVAAVEAPVDAQVATVADTYNDNINTSSI----PAASADLTAAGDVEY--------------- 779
            ...:......::...|     :|.|.|..|.    |.|.:|.|......|               
Zfish   472 GDSIRYSTHSINNNGA-----HNPNSNDGSCTLFSPGALSDETDPSQAIYTEFDDEFEEEELATP 531

  Fly   780 ---YIAAYPYESAEEGDLSFSAGEMVMVIKKE-GEWWTGTIGSR--TGMFPSNY 827
               ..|.|.:..:.||.:|...||::.|:::: |:.||....:.  .|..|::|
Zfish   532 IGQCTALYNFPGSSEGTISMQEGEVLAVVEEDKGDGWTRVRRNNGDEGYIPTSY 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dap160NP_001246118.1 EH 7..101 CDD:197477
EH 18..83 CDD:238009
EH 184..279 CDD:197477
EH 195..261 CDD:238009
GBP_C <366..467 CDD:303769 33/127 (26%)
TACC 369..570 CDD:282818 48/228 (21%)
coiled coil 432..443 CDD:293879 3/10 (30%)
coiled coil 457..467 CDD:293879 3/9 (33%)
TBPIP <495..589 CDD:284512 17/96 (18%)
SH3_Intersectin_1 674..728 CDD:212770 14/53 (26%)
SH3_Intersectin_3 779..830 CDD:212772 15/70 (21%)
SH3_Intersectin_4 941..998 CDD:212773
SH3_Intersectin_5 1025..1077 CDD:212774
trip10aXP_017209563.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.