DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dap160 and end3

DIOPT Version :9

Sequence 1:NP_001246118.1 Gene:Dap160 / 35378 FlyBaseID:FBgn0023388 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_595720.1 Gene:end3 / 2539902 PomBaseID:SPBC11G11.02c Length:375 Species:Schizosaccharomyces pombe


Alignment Length:461 Identity:87/461 - (18%)
Similarity:174/461 - (37%) Gaps:136/461 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PRERLKYQEQFRALQPQAGFVTGAQAKGFFLQSQLPPLILGQIWALADTDSDGKMNINEFSIACK 76
            |:|:.||.|.||.|.|:.|:::|::|.|....|:|....|.:||.|||.|.||..:.:||:||.|
pombe     3 PQEKNKYWEIFRGLNPENGYLSGSKAAGVLRSSKLSSDKLEKIWDLADIDDDGMFDFDEFAIAMK 67

  Fly    77 LINLKLRGM--DVPKVLPPSLLSSLTGDVPSMTPRGSTSSLSPLDPLKGIVPAVAPVVPVVAPPV 139
            :....:.|:  .||..:|.:|:|:           .....::..|.|:|                
pombe    68 ITFDLINGVYKTVPDRVPEALVST-----------SKKHLVAARDALRG---------------- 105

  Fly   140 AVATVISPPGVSVPSGPTPPTSNPPSRHTSISERAPSIES------VNQG-EWAVQAAQKRKYTQ 197
                                     :...::..:.||:::      :..| :|.:..:.|.:|:.
pombe   106 -------------------------NDDIALLHKVPSLDTDPEDAVLKDGFDWYISPSDKIRYSD 145

  Fly   198 VFNANDRTRSGYLTGSQARGVLVQSKLPQVTLAQIWTLSDIDGDGRLNCDEFILAMFLCEKAMAG 262
            :::.: ..:.|.::.:....|.....:|...:.:.|.|.:..|...:..|:.::.:.:..:...|
pombe   146 IYSLH-CNKHGEVSFNGLAPVFTPFGVPNSQIQKAWKLVNPQGTETIQKDQCLVFLHILTQRSNG 209

  Fly   263 EKIPVTLPQEW--------VPPNLRKIKSRPGSVSGVVSRPGSQPASRHASVSSQSGVGVVDADP 319
            .:||..:|...        :..||...    .|.:...|.|...|:                   
pombe   210 FRIPNDVPYSLKASFKRGNIDYNLDSY----NSTNNYYSSPTMAPS------------------- 251

  Fly   320 TAGLPGQNKRKENYVKGQAELDRRRKIMED-----QQRKEREERERK----EREEAD---KREKA 372
            |.|           .|.:::||..|.:.:.     ..|.|..:.:.|    :||..|   .:.|:
pombe   252 TGG-----------AKPKSDLDAPRDVRDSDWELISLRNELSKLDEKILSLQRETDDVNIAQNKS 305

  Fly   373 RLEAERKQQEELERQLQRQREIEMEKEEQRKRE------LEAKEAARKELEKQ-----RQQEWEQ 426
            :|         ::|.||:..:.::...:..|.:      ..|.:...|.||:|     |..|..:
pombe   306 KL---------IQRDLQKVLDYKLGILQSLKNDGPNGPSASAIDNDLKMLEQQLNVLGRHLEGRK 361

  Fly   427 ARIAEM 432
            :::|::
pombe   362 SQVAKL 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dap160NP_001246118.1 EH 7..101 CDD:197477 35/90 (39%)
EH 18..83 CDD:238009 26/64 (41%)
EH 184..279 CDD:197477 15/102 (15%)
EH 195..261 CDD:238009 8/65 (12%)
GBP_C <366..467 CDD:303769 15/81 (19%)
TACC 369..570 CDD:282818 14/75 (19%)
coiled coil 432..443 CDD:293879 0/1 (0%)
coiled coil 457..467 CDD:293879
TBPIP <495..589 CDD:284512
SH3_Intersectin_1 674..728 CDD:212770
SH3_Intersectin_3 779..830 CDD:212772
SH3_Intersectin_4 941..998 CDD:212773
SH3_Intersectin_5 1025..1077 CDD:212774
end3NP_595720.1 EF-hand_4 1..101 CDD:289529 35/108 (32%)
EH 9..74 CDD:238009 26/64 (41%)
EH 132..226 CDD:197477 14/94 (15%)
End3 193..368 CDD:289527 37/218 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11216
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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