DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dap160 and Pacsin1

DIOPT Version :9

Sequence 1:NP_001246118.1 Gene:Dap160 / 35378 FlyBaseID:FBgn0023388 Length:1190 Species:Drosophila melanogaster
Sequence 2:NP_001273672.1 Gene:Pacsin1 / 23969 MGIID:1345181 Length:441 Species:Mus musculus


Alignment Length:532 Identity:111/532 - (20%)
Similarity:203/532 - (38%) Gaps:151/532 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 TLSDIDGDGRLNCDEFILAMFLC-------EKAMAGEKIPVTLPQEWVPPNLRKIKSRPGSVSGV 291
            |:..|| ||...|::    :..|       |||.|.:.      .:|.....:.|:..|      
Mouse    25 TVKRID-DGHRLCND----LMSCVQERAKIEKAYAQQL------TDWAKRWRQLIEKGP------ 72

  Fly   292 VSRPGSQPASRHASVSSQSGVGVVDADPTAGLPGQ------NKRKENYVKGQAELDRRRKIMEDQ 350
                      ::.|:....|..:.:||..:.|..:      |:..|.....|.:...::.:...:
Mouse    73 ----------QYGSLERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFK 127

  Fly   351 QRKEREERERKEREEADKREKARLEAERKQQEEL--ERQLQRQREIEMEKE-----EQRKRELEA 408
            :.||.|:..||.::...|:.| .|||.:|.....  |.:|...||:..:.|     ||:|:.::.
Mouse   128 ETKEAEDGFRKAQKPWAKKMK-ELEAAKKAYHLACKEERLAMTREMNSKTEQSVTPEQQKKLVDK 191

  Fly   409 KEAARKELEKQRQQEWEQARIAEMNAQKEREQERVLKQKAHNTQLNVELSTLNEKIKELSQRICD 473
            .:..|::::|.::                 :.|:||:.....|...:|..   |::.|..|:..:
Mouse   192 VDKCRQDVQKTQE-----------------KYEKVLEDVGKTTPQYMEGM---EQVFEQCQQFEE 236

  Fly   474 TRAGVTNVKTVIDGMRTQRDTSMSEMS-------QLKARIKEQNAKLLQLTQERAKWEAKSKASG 531
            .|  :..:|.|:  :..:|..:::|.|       :|:..|:..:|      ||..:|...:...|
Mouse   237 KR--LVFLKEVL--LDIKRHLNLAENSSYMHVYRELEQAIRGADA------QEDLRWFRSTSGPG 291

  Fly   532 AALGGENAQQEQLNAAFAHKQLIINQIKDKVENISKEIESKKEDINTNDVQMSELKAELSALITK 596
            ..:..  .|.|:.|....|            ....||.:.||.:           .|.||     
Mouse   292 MPMNW--PQFEEWNPDLPH------------TTAKKEKQPKKAE-----------GATLS----- 326

  Fly   597 CEDLYKEYDVQRTSVLELKYNRKNETSVSSAWDTGSSSAWEETGTTVTD--------PYAVASND 653
                      ..|..:|         |.|.|.|.||.|:::...|..|:        |:  ..|:
Mouse   327 ----------NATGAVE---------STSQAGDRGSVSSYDRGQTYATEWSDDESGNPF--GGNE 370

  Fly   654 ISALAAPAVDLGGPAPEGFVKYQAVYEFNARNAEEITFVPGDIILVPLEQNAEPGWLAGEI-NGH 717
            .:..|.|..|    ..:| |:.:|:|:::.:..:|::|..|| .|..|.:..|.||..|.: :|.
Mouse   371 ANGGANPFED----DAKG-VRVRALYDYDGQEQDELSFKAGD-ELTKLGEEDEQGWCRGRLDSGQ 429

  Fly   718 TGWFPESYVEKL 729
            .|.:|.:|||.:
Mouse   430 LGLYPANYVEAI 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dap160NP_001246118.1 EH 7..101 CDD:197477
EH 18..83 CDD:238009
EH 184..279 CDD:197477 12/51 (24%)
EH 195..261 CDD:238009 10/33 (30%)
GBP_C <366..467 CDD:303769 22/107 (21%)
TACC 369..570 CDD:282818 42/214 (20%)
coiled coil 432..443 CDD:293879 1/10 (10%)
coiled coil 457..467 CDD:293879 1/9 (11%)
TBPIP <495..589 CDD:284512 17/100 (17%)
SH3_Intersectin_1 674..728 CDD:212770 17/54 (31%)
SH3_Intersectin_3 779..830 CDD:212772
SH3_Intersectin_4 941..998 CDD:212773
SH3_Intersectin_5 1025..1077 CDD:212774
Pacsin1NP_001273672.1 F-BAR_PACSIN1 16..273 CDD:153364 58/299 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 297..380 26/131 (20%)
SH3_PACSIN1-2 385..440 CDD:212931 18/55 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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