DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nhe2 and NHX6

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_178079.2 Gene:NHX6 / 844299 AraportID:AT1G79610 Length:535 Species:Arabidopsis thaliana


Alignment Length:567 Identity:146/567 - (25%)
Similarity:249/567 - (43%) Gaps:109/567 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   224 PESCLLIVVGVVIGVVLYFC-TDVAVSP---LTPNTFFFYMLPPIILDAGYFMPNRLFFDNLGTI 284
            ||:...:::|:::|.:.... |:.::..   .....||.::|||||..:|:.:..:.||.|.|.|
plant    54 PEASASLLIGLIVGGLANISNTETSIRTWFNFHDEFFFLFLLPPIIFQSGFSLQPKPFFSNFGAI 118

  Fly   285 LLMAVVGTIFNIATIGGSLYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAVFEEIHVNE 349
            :..:|:||.......|..:|..|.|.:.  ...| .::..:|.|||||.|||.||::|:|:..:.
plant   119 VTFSVLGTFVASMVTGLLVYLGGVMFLM--YRLP-FVECLMFGSLISATDPVTVLSIFQELGSDV 180

  Fly   350 ILYIVVFGESLLNDAVTVVMYHMMESYNEIGLDKIIAQDIASGVGSFFVVA------LGGTAIGI 408
            .||.:|||||:||||:.:.:|..|.          :.:..:||...|.|:.      :|..:.|:
plant   181 NLYALVFGESVLNDAMAISLYRTMS----------LVRSHSSGQNFFMVIVRFLETFVGSMSAGV 235

  Fly   409 IWGFLTGLVTRF----TDHVRVIEPIFIFVMAYLAYLNAEIFHMSGILAITFCGITMKNYVESNI 469
            ..||.:.|:.::    .|:::.:|.....:..|.:|:.||...:|||::|.|.||.||:|..||:
plant   236 GVGFTSALLFKYAGLDVDNLQNLECCLFVLFPYFSYMLAEGLSLSGIVSILFTGIVMKHYTYSNL 300

  Fly   470 SQKSHTTVKYALKMLSSSAETIIFMFLGVATVNNMHVW-NTWFVVLTIAFCSVFRVIGVILLSAL 533
            |..|...|.....::||.|||.:|:::|.......|.| :..|:..:|.|..:.|...|.....|
plant   301 SANSQRFVSAFFHLISSLAETFVFIYMGFDIAMEKHSWSHLGFIFFSILFIVIARAANVFGCGYL 365

  Fly   534 ANRFR-LH-KLSRVDQFVMSYGGLRGAVAFALVLLVDENVVKQKNMFV-TTTIAVIYFTVFLQGI 595
            .|..| .| |:....|..:.|.|||||:||||.|....::.:.....: |.|.|::..||.|.|.
plant   366 VNLARPAHRKIPMTHQKALWYSGLRGAMAFALALQSVHDLPEGHGQTIFTATTAIVVLTVLLIGG 430

  Fly   596 TIKPLVKILNVKRANKRKPTMNERIHERFMDHLMAGIEDIVGKTGNYNVRDKFKRFDNRFIRPLL 660
            :...:::.|                             ::||.:.:.::.|.|:..::|::....
plant   431 STGTMLEAL-----------------------------EVVGDSHDTSLGDGFEVVNSRYMTSYD 466

  Fly   661 IRDL---KGAEPKIIETYSKLTMRDAMEVMRRNPSTIGQMTGTESMSALFRNYTNNYIGGSPSLT 722
            ..|.   .|...|:.|.:..                          :|.|.....||:  :|..|
plant   467 DEDTPPGSGFRTKLREFHKS--------------------------AASFTELDRNYL--TPFFT 503

  Fly   723 NLDNTCSRNLDMAELDYNPSKKDLTDARIHHLLAEELKPYRRHRRLS 769
            :.:.           ||:    |..:...||   ||..|:.|...|:
plant   504 SNNG-----------DYD----DEGNMEQHH---EERIPFTRRGNLN 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 130/500 (26%)
Na_H_Exchanger 199..602 CDD:279355 120/395 (30%)
NHX6NP_178079.2 NhaP 23..446 CDD:223104 123/433 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000129
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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