DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe2 and NHX3

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_200358.1 Gene:NHX3 / 835640 AraportID:AT5G55470 Length:529 Species:Arabidopsis thaliana


Alignment Length:495 Identity:137/495 - (27%)
Similarity:219/495 - (44%) Gaps:85/495 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 ESCLLIVVGVVIGVVLYFCTDVAVSPL---TPNTFFFYMLPPIILDAGYFMPNRLFFDNLGTILL 286
            ||...|:||...|.|:...:....|.:   ....||.|:|||||.:||:.:..:.||.|..||:.
plant    48 ESITAILVGAASGTVILLISKGKSSHILVFDEELFFIYLLPPIIFNAGFQVKKKKFFHNFLTIMS 112

  Fly   287 MAVVGTIFNIATIG-GSLYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAVFEEIHVNE- 349
            ..|:|...:...|. |:.:...|:|..|.|    ..|.....::.|:.|.|..|.:   :|.:| 
plant   113 FGVIGVFISTVIISFGTWWLFPKLGFKGLS----ARDYLAIGTIFSSTDTVCTLQI---LHQDET 170

  Fly   350 -ILYIVVFGESLLNDAVTVVMYHMMESYNEIGLDKIIAQDIASGVGSFFVVALGGTAIGIIWGFL 413
             :||.:||||.::|||.:||:::.::   :|..:.:.........|:|..:....|.:||..|.:
plant   171 PLLYSLVFGEGVVNDATSVVLFNAVQ---KIQFESLTGWTALQVFGNFLYLFSTSTLLGIGVGLI 232

  Fly   414 TGLVTR---FTDHVRVIEPIFIFVMAYLAYLNAEIFHMSGILAITFCGITMKNYVESNISQKSHT 475
            |..|.:   |..|....|...:.:||||:|:.||:|.:||||.:.|||:.|.:|...|:::.|..
plant   233 TSFVLKTLYFGRHSTTRELAIMVLMAYLSYMLAELFSLSGILTVFFCGVLMSHYASYNVTESSRI 297

  Fly   476 TVKYALKMLSSSAETIIFMFLGVATVNNMHVWNTWFVVLTIAFCSVFRVIGVIL----------- 529
            |.::...|||..|||.||:::|...: :...|.|    .:::|.....|.|||.           
plant   298 TSRHVFAMLSFIAETFIFLYVGTDAL-DFTKWKT----SSLSFGGTLGVSGVITALVLLGRAAFV 357

  Fly   530 --LSALANRFRLH-----KLSRVDQFVMSYGGL-RGAVAFAL---------VLLVDENVVKQKNM 577
              ||.|.|....|     .::...|.::.:.|| ||||:.||         |.|...|..     
plant   358 FPLSVLTNFMNRHTERNESITFKHQVIIWWAGLMRGAVSIALAFKQFTYSGVTLDPVNAA----- 417

  Fly   578 FVTTTIAVIYFTVFLQGITIKPLVKILNVKRANKRKPTMNERIH--------------------- 621
            .||.|..|:.||..:.|...||||..|..:.|:.......:|..                     
plant   418 MVTNTTIVVLFTTLVFGFLTKPLVNYLLPQDASHNTGNRGKRTEPGSPKEDATLPLLSFDESAST 482

  Fly   622 --ERFMDHLMAGIEDIVGKTGNYNVRDKFKRFDNRFIRPL 659
              .|..|.:...:|..|     |.:...:::||:.::||:
plant   483 NFNRAKDSISLLMEQPV-----YTIHRYWRKFDDTYMRPI 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 137/495 (28%)
Na_H_Exchanger 199..602 CDD:279355 124/413 (30%)
NHX3NP_200358.1 b_cpa1 23..>444 CDD:273294 125/415 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000129
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10110
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X654
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.910

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