DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe2 and Nha1

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_723224.2 Gene:Nha1 / 33961 FlyBaseID:FBgn0031865 Length:715 Species:Drosophila melanogaster


Alignment Length:678 Identity:133/678 - (19%)
Similarity:226/678 - (33%) Gaps:189/678 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ESLFKTYASVITDTSANEIDAEAPPP--------------------PRDK---TKTRIEPQIAPA 77
            ||..|...|:|:|           ||                    ||.|   |.|.....|.||
  Fly    69 ESQPKRRVSIISD-----------PPMIGGNGGLGTGYDNPAYEQNPRRKISQTSTHSHTDIGPA 122

  Fly    78 KRNSSCTSSDWRGMFSKRTLLICALALILGSAQARPNTSAVGVAPRKVSQDIVDAVTQLNLGQSA 142
            :|.|....:                                  ||.....|.|...:..|..|:|
  Fly   123 RRKSILKDT----------------------------------APHDNESDRVSTHSYENYRQNA 153

  Fly   143 PIDAVDV-----------GLDPTPSARVPRPEPLKSGDENAKGDE---------GHKMERYPLSS 187
             :|.::.           |......|.......:.:.....:|:|         ..|:..|||..
  Fly   154 -LDVLNAKYNGHQMGHNGGGSSNGGANYVEESWMYNFCLKCRGEEPSASWEPPFWQKIFPYPLCP 217

  Fly   188 V--DFARVKTPFIIGIWILSASIAKIGFHMTPKLHLI--------------------FPESCLLI 230
            .  ..:|:.:..:||:.|...:...||....|...|.                    .|....::
  Fly   218 TFRTVSRLISIILIGVLIWVTAFVIIGDSAAPGGQLFGLVVLTVAANFGGYLISLTTLPRLIGML 282

  Fly   231 VVGVVIGVVLYFCTDVAVSPLTPNTFFFYMLPPIILDAGYFMPNRLFFDNLGTILLMAVVGTIFN 295
            :||::...|.:...|...|.:|.:...| .|..|:..||..|....|.....|||.:.::.....
  Fly   283 LVGILFQNVGWADIDGDFSKVTAHLRKF-ALTIILTRAGLEMEPEAFKKVYKTILKLGIIPWCVE 346

  Fly   296 IATIGGSLYACGKMGIYGESETPGLMDV-----FLFASLISAVDPVAVLAVFEEIHVN------- 348
            ...          |.:....    |:|:     ||..|:|:||.|..|:.....:...       
  Fly   347 AVV----------MAVMSHF----LLDLPWIWAFLLGSIIAAVSPAVVVPCLFRLRTKGYGVAKG 397

  Fly   349 -EILYIVVFGESLLNDAVTVVMYHMMESYNEIGLDKIIAQDIASGVGSFFVVALGGTAIGIIWGF 412
             ..|.:.|.|   ::||::|.::.::.:.  :..||.:|..||...    |..|||...|::||.
  Fly   398 IPTLVVAVAG---VDDALSVAIFGIISTV--MFSDKGLAYQIAQAP----VCILGGLGFGVVWGS 453

  Fly   413 LTGLVTRFTD-HVRVIEPIFIFVMAYLAYLNAEI--FHMSGILAITFCGITMKNY-------VES 467
            |..:.....| :|..:..:.:|....:|...:|.  |..:|.||:.|.......:       ||.
  Fly   454 LARIFPEKGDAYVVPLRTLLLFTGGLMAIYGSEELGFEGAGPLAVVFSAFVSNLFWCKDGWDVED 518

  Fly   468 NISQKSHTTVKYALKMLSSSAETIIFMFLGVATVN----NMHVWNTWFVVLTIAFCSVF--RVIG 526
            |       .|..|.::.....|.|:|...| ||:.    :.|       .::|....:|  .::.
  Fly   519 N-------PVSTAFEIFWMIFEPILFGLTG-ATIKIRELDSH-------TVSIGAACIFTGAILR 568

  Fly   527 VILLSALANRFRLHKLSRVDQFV----MSYGGLRGAVA-FALVLLVDENVVKQKNMF-VTTTIAV 585
            ::..:.:|...||:...:.  ||    |:...::.|:. .||..|.|:...:::|.. :..||.|
  Fly   569 ILTTAGIAFGDRLNTKEKF--FVGLSWMAKATVQAALGPVALKHLGDDATEEERNWANIVQTICV 631

  Fly   586 IYFTVFLQGITIKPLVKILNVKRANKRK 613
              |::.|.......::.:...|...|.|
  Fly   632 --FSIVLTAPLGAIMISVTGTKLLTKTK 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 99/480 (21%)
Na_H_Exchanger 199..602 CDD:279355 95/457 (21%)
Nha1NP_723224.2 Na_H_Exchanger 256..646 CDD:279355 88/432 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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