DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe2 and Nhe3

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_723202.2 Gene:Nhe3 / 33939 FlyBaseID:FBgn0028703 Length:711 Species:Drosophila melanogaster


Alignment Length:687 Identity:169/687 - (24%)
Similarity:282/687 - (41%) Gaps:152/687 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   171 NAKGDEGHKMERYPLSSVDFARVKTPFIIGIWILSASIAKIGFHMTPKLHLIFPESCLLIVVGVV 235
            :||....|:::...|....|....|  ::.||:..       .|....||    |:.|.::.|::
  Fly    26 DAKATLNHRIQSLDLLVFVFLLALT--VLTIWLFK-------HHRVSWLH----ETGLAVIYGLI 77

  Fly   236 IGVVLYFC------TDVAVSP---------LTPNT------------------------------ 255
            :|.::.:.      ..:.|.|         |.|:|                              
  Fly    78 VGAIIRYAGTSATLVHMQVEPQGVPTYSDKLPPDTLWFRYPVNQTNGTKPPEGIKTYAYVFRGQV 142

  Fly   256 ------------------FFFYMLPPIILDAGYFMPNRLFFDNLGTILLMAVVGTIFNIATIGGS 302
                              ||..:|||||..|||.:..:.||.|||.||..|:|||..:...|||.
  Fly   143 HDVDENEIDLKATFDPEVFFNIILPPIIFYAGYSLKKKYFFRNLGAILTFAIVGTTLSAFLIGGF 207

  Fly   303 LYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTV 367
            :|.|.|:.....|.:...:|...|.:|||..||:.:||:|.::.|:..||.:|.|||:|||||.:
  Fly   208 MYGCVKLMPKYLSSSFTFLDSLYFGALISPTDPLTILAIFNDLRVDVNLYALVLGESVLNDAVAI 272

  Fly   368 VMYHMMESYNE--IGLDKIIAQDIASGVGSFFVVALGGTAIGIIWGFLTGLVTRFTDHVR---VI 427
            |:...:::|.|  ....:.........:..||.:.|....||...|.||.|:|:|| .||   ::
  Fly   273 VLSGAIQNYGEHYSNTGEFETTAFLRSLSDFFSIFLLSLMIGAAMGCLTALMTKFT-RVRDFPLL 336

  Fly   428 EPIFIFVMAYLAYLNAEIFHMSGILAITFCGITMKNYVESNISQKSHTTVKYALKMLSSSAETII 492
            |.....:|:|..:|.||...::|::|:.||||...:|..:|:|:.|....|...::|:..||..|
  Fly   337 ESALFVLMSYSTFLLAEATELTGVVAVLFCGICQAHYTYNNLSEDSRQRTKQIFELLNFLAENFI 401

  Fly   493 FMFLGVATVN-NMHVWNTWFVVLTIAFCSVFRVIGVILLSALANRFRLHKLSRVDQFVMSYGGLR 556
            |.::||:... ..|.::..|::......::.|.:.|..||.|.|..|..|:|...|.::.:.|||
  Fly   402 FSYIGVSMFTFPKHHFDAGFIITAFICAAIGRAVNVYPLSWLLNIKRKPKISTNFQHMLFFAGLR 466

  Fly   557 GAVAFALVLLVDENVVKQKNMFVTTTIAVIYFTVFLQGITIKPLVKILNVKRANKRKPTMNERIH 621
            ||::|||.  :...|..::...:|.|..::.|||.:||.....|:..|.:.              
  Fly   467 GAMSFALA--IRNTVSDERQTMLTATSLIVIFTVVIQGGAANFLLNWLKIP-------------- 515

  Fly   622 ERFMDHLMAGIEDIVGKTGNYNVRDKFKRFDNRFIRPLLIRDLKGAEPKIIETY----------- 675
                    .|::|...:..||.|...:...||             :.|:..:.|           
  Fly   516 --------VGVDDETEQLNNYQVHSVYNSMDN-------------SHPQTSDGYLQDVEGGGVNR 559

  Fly   676 SKLTMRDAMEVMRRNP--STIGQMTGTES-----------MSALFRNYTNNYIGGSPSLTNLDNT 727
            :|:.:....:.....|  .|.|.:.|...           ::.::.|:...|:  .|.||:...|
  Fly   560 NKMRLSGGTDTNLDTPVDGTNGSLGGASGGRRRNSHEKAILARIWGNFDTKYM--KPLLTHSRPT 622

  Fly   728 CSRNLDMAELDYNPSKKDLTDARIHHLLAEELKPYRR 764
            ....|.:.   .||..:.||..:   .|.::...:||
  Fly   623 LLETLPVC---CNPIARLLTTTQ---QLTQDGSEFRR 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 151/607 (25%)
Na_H_Exchanger 199..602 CDD:279355 134/471 (28%)
Nhe3NP_723202.2 b_cpa1 155..>531 CDD:273294 125/400 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468117
Domainoid 1 1.000 89 1.000 Domainoid score I412
eggNOG 1 0.900 - - E1_COG0025
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000129
OrthoInspector 1 1.000 - - otm51371
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.840

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