DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nhe2 and Slc9a6

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:XP_038956424.1 Gene:Slc9a6 / 302863 RGDID:1563582 Length:732 Species:Rattus norvegicus


Alignment Length:691 Identity:189/691 - (27%)
Similarity:301/691 - (43%) Gaps:162/691 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 KGDEGHKMERYPLSSVDFARVKTPFIIGIWILSASIAKIGFHMTPKLHLIFPESCLLIVVGVVIG 237
            :.:|.|:.:...|  :.|..:.|..|:.||:.....|:.       ||    |:.|.::.|:::|
  Rat    63 QAEESHRQDSANL--LIFILLLTLTILTIWLFKHRRARF-------LH----ETGLAMIYGLLVG 114

  Fly   238 VVLYF--------------CTDVAVSPLT------------------------------------ 252
            :||.:              | :|..||.|                                    
  Rat   115 LVLRYGIHVPSDVNNVTLSC-EVQSSPTTLLVNVSGKFYEYTLKGEISSHELNNVQDNEMLRKVT 178

  Fly   253 --PNTFFFYMLPPIILDAGYFMPNRLFFDNLGTILLMAVVGTIFNIATIGGSLYAC-GKMGIYGE 314
              |..||..:|||||..|||.:..|.||.|||:||..|.:||..:...||..:|.| ..|.:.| 
  Rat   179 FDPEVFFNILLPPIIFYAGYSLKRRHFFRNLGSILAYAFLGTAISCFVIGSIMYGCVTLMKVTG- 242

  Fly   315 SETPG---LMDVFLFASLISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVMYHMMESY 376
             :..|   ..|..||.:::||.|||.|||:|.|:.|:..||.::||||:|||||.:|:...:.:|
  Rat   243 -QLAGDFYFTDCLLFGAIVSATDPVTVLAIFHELQVDVELYALLFGESVLNDAVAIVLSSSIVAY 306

  Fly   377 NEIGLDKIIAQDIAS---GVGSFFVVALGGTAIGIIWGFLTGLVTRFTD--HVRVIEPIFIFVMA 436
            ...| |.....|:.:   .:|.|..:..|..|:|...|.:|.|||:||.  ..:::|....|:|:
  Rat   307 QPAG-DNSHTFDVTAMFKSIGIFLGIFSGSFAMGAATGVVTALVTKFTKLREFQLLETGLFFLMS 370

  Fly   437 YLAYLNAEIFHMSGILAITFCGITMKNYVESNISQKSHTTVKYALKMLSSSAETIIFMFLGVA-- 499
            :..:|.||.:..:|::|:.|||||..:|..:|:|.:|....|...::|:..||..||.::|:.  
  Rat   371 WSTFLLAEAWGFTGVVAVLFCGITQAHYTYNNLSTESQHRTKQLFELLNFLAENFIFSYMGLTLF 435

  Fly   500 TVNNMHVWNTWFVVLTIAFCSVF--RVIGVILLSALANRFRLHKLSRVDQFVMSYGGLRGAVAFA 562
            |..| ||:|..|||  .||.::|  |...:..||.|.|..|..|:....|.:|.:.|||||:|||
  Rat   436 TFQN-HVFNPTFVV--GAFIAIFLGRAANIYPLSLLLNLGRRSKIGSNFQHMMMFAGLRGAMAFA 497

  Fly   563 LVLLVDENVVKQKNMFVTTTIAVIYFTVFLQGITIKPLVKILNVKRANKRKPTMNERIHERFMD- 626
            |.  :.:.....:.|..:||:.:::|||::.|.....::..|:::...:.....:|..|..:.. 
  Rat   498 LA--IRDTATYARQMMFSTTLLIVFFTVWVFGGGTTAMLSCLHIRYYARLWGYRDELRHGLYPQG 560

  Fly   627 -HLMAGIEDIVGKTG---NYNVRDKFKR---------------FDNRFIRPLLIRDLKGAEPKII 672
             |.:.|..|.||...   :..|.|..:|               ||:.:::|||..    :.|.:.
  Rat   561 AHSLFGETDRVGVDSDQEHLGVPDNERRTTKAESAWLFRMWYNFDHNYLKPLLTH----SGPPLT 621

  Fly   673 ETY---------------------------SKLTMRDAMEVMRRNPSTIG----------QMTGT 700
            .|.                           |.|.:.|....:....||:.          :..||
  Rat   622 TTLPACCGPIARCLTSPQAYENQEQLKDDDSDLILNDGDISLTYGDSTVNTESATASAPRRFMGT 686

  Fly   701 ESMSALFRNYT----NNYIGGS----------PSLTNLDNT 727
            .:..||.|..|    ...|.|:          |:|.:||:|
  Rat   687 STEDALDRELTFGDHELVIRGTRLVLPMDDSEPALNSLDDT 727

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 175/636 (28%)
Na_H_Exchanger 199..602 CDD:279355 147/467 (31%)
Slc9a6XP_038956424.1 b_cpa1 94..>540 CDD:273294 146/465 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000129
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.