DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe2 and Slc9c1

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_001008762.2 Gene:Slc9c1 / 288117 RGDID:1309075 Length:1181 Species:Rattus norvegicus


Alignment Length:691 Identity:126/691 - (18%)
Similarity:252/691 - (36%) Gaps:214/691 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 IWILSASIAKIGFHMTPKLHL---IFPESCLLIVVGVVIGVVLYFCTDV-----AVSPLTPNTFF 257
            |.|||. |..||..:  .:||   ..|...:|.::|....::.:..|.:     |:..:.|:.||
  Rat    39 ILILSL-ICTIGAFL--NMHLKDFPIPLPVILFLIGCCFEILSFASTQIQLYADAIQWMDPDMFF 100

  Fly   258 FYMLPPIILDAGY----FMPNRLFFDNLGTILLMAVVGTIFNIATIGGSLYACGKMGIYGESETP 318
            ....|.||.:..:    :|..:||:.    |||:.:.|.:.|...|...|.:..|:.:   ...|
  Rat   101 GIFTPVIIFNVAFDMDIYMLQKLFWQ----ILLITIPGFMINYTLILWYLQSVNKLSL---KTIP 158

  Fly   319 GLMDVFLFASLISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVMYH--MMESYNEIGL 381
            .|    ||::::.:.||:...|...::.::..|..::.|||||...:::::|.  :..|:....:
  Rat   159 WL----LFSAVLISSDPMLTSASIRDLGLSRSLTNLINGESLLTSVISLIIYSAVVQISFKSKHM 219

  Fly   382 DKIIAQDIASGVGSFFVVALGGTAIGIIWGFLTGLV----------TRFTDHVRVIEPIFIFVMA 436
            :..:|..:.|...|:.|.:           |:||::          |.|.|.|..|  ..||.:.
  Rat   220 NHTLAHKVMSTAWSYLVES-----------FITGILITKAIQLWMATIFGDDVNHI--TLIFSVL 271

  Fly   437 YLAYLNAEIFHMSGILAITFCGITMKNYVESNISQKSHTTVKYALK--------MLSSSAETIIF 493
            ||.:...|:..||||..:...|:.:.:           |:.|..::        .||.....::|
  Rat   272 YLIFYVCELIGMSGIFTLATIGLFLNS-----------TSFKPGVEAFLLEFWNCLSFIGFLMVF 325

  Fly   494 MFLGVATVNNMHVW----------NTWFVVLTIAFCSVFRVIGVILLSALANRFRLHKLSRVDQF 548
            .|:|:....:.:::          |.:|.::      |.|::..:|:|.:.:|.. |..|....|
  Rat   326 TFIGLLIPAHTYLYISFSDVYYSLNIYFTLI------VLRLLVFLLMSPILSRLG-HGFSWRWAF 383

  Fly   549 VMSYGGLRGAVAFALVLLVDENVV-----KQKNMFVTTTIAVIYFTVFLQGITIKPLVKILNVKR 608
            :|.:..::|.....:.||:..:.|     ::::..:...::|...|:.:                
  Rat   384 IMVWSEMKGTPNINMALLLAYSDVSLGSERERSQILFHGVSVCVITLIV---------------- 432

  Fly   609 ANKRKPTMNERIHERFMDHLMAGIEDIVGKTGNYNVRDKFKRFDNRFIRPLLI-----RDLKGAE 668
                                                        ||||.|:.:     ||:...:
  Rat   433 --------------------------------------------NRFILPMAVIKLGLRDVTSTK 453

  Fly   669 PKII----ETYSKLTMRDAM------------------EVMRRNPSTIGQMTGTESMSALFRNYT 711
            .|.:    :.:.:||...||                  .::.:||..:.|...||.......:  
  Rat   454 YKSVYYTFQHFQELTKSTAMALKFDKDLANADWNMVDKAIILQNPYALNQEETTEHQKVKCPD-- 516

  Fly   712 NNYIGGSPSLTNLDNTCSRNLDMAELDYNPSKKDLTDARIHHLLAEELKPYRRHRRLSYSRHAVD 776
                            |::.:|..   .|....:|.:.|   ||:.::..|:|..|         
  Rat   517 ----------------CNKEIDET---LNIEAMELANRR---LLSAQIASYQRQYR--------- 550

  Fly   777 DRDLSTQVNYKMQMNFRRMFNDRKHHKRSKRGASN-KEAKE 816
             .::.:|...::.:.....|.::|....|.....| .|:|:
  Rat   551 -NEILSQSAMQVLVGAAGSFGEKKGEYMSPENIKNYSESKK 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 109/576 (19%)
Na_H_Exchanger 199..602 CDD:279355 92/447 (21%)
Slc9c1NP_001008762.2 Na_H_Exchanger 35..457 CDD:294713 100/522 (19%)
Crp 890..1077 CDD:223736
CAP_ED 893..1020 CDD:237999
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352300
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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