DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe2 and Slc9c1

DIOPT Version :10

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_001008762.2 Gene:Slc9c1 / 288117 RGDID:1309075 Length:1181 Species:Rattus norvegicus


Alignment Length:691 Identity:126/691 - (18%)
Similarity:252/691 - (36%) Gaps:214/691 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   201 IWILSASIAKIGFHMTPKLHL---IFPESCLLIVVGVVIGVVLYFCTDV-----AVSPLTPNTFF 257
            |.|||. |..||..:  .:||   ..|...:|.::|....::.:..|.:     |:..:.|:.||
  Rat    39 ILILSL-ICTIGAFL--NMHLKDFPIPLPVILFLIGCCFEILSFASTQIQLYADAIQWMDPDMFF 100

  Fly   258 FYMLPPIILDAGY----FMPNRLFFDNLGTILLMAVVGTIFNIATIGGSLYACGKMGIYGESETP 318
            ....|.||.:..:    :|..:||:.    |||:.:.|.:.|...|...|.:..|:.:   ...|
  Rat   101 GIFTPVIIFNVAFDMDIYMLQKLFWQ----ILLITIPGFMINYTLILWYLQSVNKLSL---KTIP 158

  Fly   319 GLMDVFLFASLISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAVTVVMYH--MMESYNEIGL 381
            .|    ||::::.:.||:...|...::.::..|..::.|||||...:::::|.  :..|:....:
  Rat   159 WL----LFSAVLISSDPMLTSASIRDLGLSRSLTNLINGESLLTSVISLIIYSAVVQISFKSKHM 219

  Fly   382 DKIIAQDIASGVGSFFVVALGGTAIGIIWGFLTGLV----------TRFTDHVRVIEPIFIFVMA 436
            :..:|..:.|...|:.|.:           |:||::          |.|.|.|..|  ..||.:.
  Rat   220 NHTLAHKVMSTAWSYLVES-----------FITGILITKAIQLWMATIFGDDVNHI--TLIFSVL 271

  Fly   437 YLAYLNAEIFHMSGILAITFCGITMKNYVESNISQKSHTTVKYALK--------MLSSSAETIIF 493
            ||.:...|:..||||..:...|:.:.:           |:.|..::        .||.....::|
  Rat   272 YLIFYVCELIGMSGIFTLATIGLFLNS-----------TSFKPGVEAFLLEFWNCLSFIGFLMVF 325

  Fly   494 MFLGVATVNNMHVW----------NTWFVVLTIAFCSVFRVIGVILLSALANRFRLHKLSRVDQF 548
            .|:|:....:.:::          |.:|.::      |.|::..:|:|.:.:|.. |..|....|
  Rat   326 TFIGLLIPAHTYLYISFSDVYYSLNIYFTLI------VLRLLVFLLMSPILSRLG-HGFSWRWAF 383

  Fly   549 VMSYGGLRGAVAFALVLLVDENVV-----KQKNMFVTTTIAVIYFTVFLQGITIKPLVKILNVKR 608
            :|.:..::|.....:.||:..:.|     ::::..:...::|...|:.:                
  Rat   384 IMVWSEMKGTPNINMALLLAYSDVSLGSERERSQILFHGVSVCVITLIV---------------- 432

  Fly   609 ANKRKPTMNERIHERFMDHLMAGIEDIVGKTGNYNVRDKFKRFDNRFIRPLLI-----RDLKGAE 668
                                                        ||||.|:.:     ||:...:
  Rat   433 --------------------------------------------NRFILPMAVIKLGLRDVTSTK 453

  Fly   669 PKII----ETYSKLTMRDAM------------------EVMRRNPSTIGQMTGTESMSALFRNYT 711
            .|.:    :.:.:||...||                  .::.:||..:.|...||.......:  
  Rat   454 YKSVYYTFQHFQELTKSTAMALKFDKDLANADWNMVDKAIILQNPYALNQEETTEHQKVKCPD-- 516

  Fly   712 NNYIGGSPSLTNLDNTCSRNLDMAELDYNPSKKDLTDARIHHLLAEELKPYRRHRRLSYSRHAVD 776
                            |::.:|..   .|....:|.:.|   ||:.::..|:|..|         
  Rat   517 ----------------CNKEIDET---LNIEAMELANRR---LLSAQIASYQRQYR--------- 550

  Fly   777 DRDLSTQVNYKMQMNFRRMFNDRKHHKRSKRGASN-KEAKE 816
             .::.:|...::.:.....|.::|....|.....| .|:|:
  Rat   551 -NEILSQSAMQVLVGAAGSFGEKKGEYMSPENIKNYSESKK 590

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 Na_H_Exchanger 189..704 CDD:470090 109/576 (19%)
Slc9c1NP_001008762.2 NhaP 37..556 CDD:439796 119/655 (18%)
CAP_ED 893..1020 CDD:237999
Blue background indicates that the domain is not in the aligned region.

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