DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe2 and nhx-8

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_001021728.1 Gene:nhx-8 / 189474 WormBaseID:WBGene00003735 Length:681 Species:Caenorhabditis elegans


Alignment Length:635 Identity:186/635 - (29%)
Similarity:299/635 - (47%) Gaps:71/635 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 KRTLLICALALI---LGSAQARPNTSAVGVAPRKVSQDIVDAVTQLN-LGQSAPIDAVDVGLDPT 154
            |..|.||...||   :.|..:..:.||..|:....|:|.|.||.:.: ||::  |||....|:..
 Worm    32 KTALSICIFLLIFQTVDSDSSDSSASASVVSGAVKSEDTVVAVNKTDVLGEA--IDANATSLEQH 94

  Fly   155 PSARVPRPEPLKSGDENAKGDEGHKMERYPLSSVDFARVKTPFIIGIWILSASIAKIGFHM--TP 217
            .:|.|                 |:..|....|...|      ||:.:.:|:..:.    ||  ..
 Worm    95 GAAIV-----------------GNVSEEKKRSLAIF------FILFVIMLATLVV----HMLIVS 132

  Fly   218 KLHLIFPESCLLIVVGVVIGVVL-YFCTDVA-VSPLTPNTFFFYMLPPIILDAGYFMPNRLFFDN 280
            |:|.: |||..::.:|.:||.:| |...|.: :..|:|:.||..:|||||.:..|.:....||.|
 Worm   133 KIHWM-PESLAIVALGALIGSILSYSRRDWSEIEALSPDVFFLVLLPPIIFENAYNLNKGYFFSN 196

  Fly   281 LGTILLMAVVGTIFNIATIGGSLYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAVFEEI 345
            ...||..|:.||..:...||..||..|.:|:..|..   ..:.|.||::|||||||..||:|:.:
 Worm   197 FVPILTFAIFGTTISAMVIGAGLYILGAIGLIFEFT---FFECFAFAAMISAVDPVGTLAIFQAV 258

  Fly   346 HVNEILYIVVFGESLLNDAVTVV-----MYHMMESYNEIGLDKIIAQDIASGVGSFFVVALGGTA 405
            .|..:||::|||||:|||||::|     :.|...|:|.:...:||.....:....||..|..|..
 Worm   259 KVESLLYMLVFGESMLNDAVSIVLAATALRHAKPSFNSLPASEIITSAFVTFTEMFFFSACLGVG 323

  Fly   406 IGIIWGFLTGLVTRFTDHVRV--IEPIFIFVMAYLAYLNAEIFHMSGILAITFCGITMKNYVESN 468
            ||:    |:.|:.:..|..:.  :|...:.:.:|:.|..||...:|||:||.||||:|..:...|
 Worm   324 IGL----LSALLFKHVDLRKTPSLEFALLLIFSYIPYGFAEALDLSGIMAILFCGISMSQFTRHN 384

  Fly   469 ISQKSHTTVKYALKMLSSSAETIIFMFLGVATVNNMHVWNTWFVVLTIAFCSVFRVIGVILLSAL 533
            :|..:..|.::..:.:|..|||..|.::|:|.......:..|.:..::..|.:.|...|..|:.|
 Worm   385 VSPIAQITFRHTFRTISFVAETSTFAYIGMAFFTIKLNFAPWLIFWSVVLCLLGRACNVFPLAYL 449

  Fly   534 ANRFRLH-KLSRVDQFVMSYGGLRGAVAFALVLLVDENVVKQKNMFVTTTIAVIYFTVFLQGITI 597
            .|:.|.. ::|..:|.:|.:.|:||||.|||||.:|.:..| |::.:||.:.:|.||....|.:.
 Worm   450 VNQCRKDVQISMKNQIIMWFSGMRGAVCFALVLYMDLDKEK-KSILLTTVLFLILFTTIFLGGSA 513

  Fly   598 KPLVKILN----VKRANKRKPTMNERIHERFMDHLMAGIEDIVGKTGNYNVRDKFKRFD-----N 653
            .|.:..:|    .:|..||:.|...:........||......:...|:.:...|....|     .
 Worm   514 LPFISFINRCYPNERQRKRRRTPRNKESTGNSSALMMSKTQEMSFFGSDDWGPKKSALDATSSAG 578

  Fly   654 RFIRPLLIRDLKGAEPKIIETYSKLTMRDAMEVMRRNPSTIGQMTGTESM 703
            |.:|.|.:|.....|        :|..||.:..:.:......|||.::.:
 Worm   579 RIMRQLFVRKFTAIE--------RLENRDKLAALTKRALASDQMTDSDDV 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 160/536 (30%)
Na_H_Exchanger 199..602 CDD:279355 136/414 (33%)
nhx-8NP_001021728.1 NhaP 109..517 CDD:223104 140/426 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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