DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nhe2 and slc-9B.1

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_509724.1 Gene:slc-9B.1 / 181236 WormBaseID:WBGene00009617 Length:516 Species:Caenorhabditis elegans


Alignment Length:557 Identity:112/557 - (20%)
Similarity:204/557 - (36%) Gaps:129/557 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   193 VKTPFIIGIWILSASIAKIG--------FHMTP-----------KLHLIFPESCLLIVVGVVIGV 238
            :.|..:|.|.:..:.|..:|        .|:.|           .:.:||    :|:|.|:....
 Worm    23 ITTTILIFISLYISIITLLGENFLNPLADHVNPVNATNEDVTVRSIFVIF----ILLVAGIFAAK 83

  Fly   239 V--------LYFCTDVAVSPLTPN-TFF--FYMLPP-------------IILDAGYFMPNRLFFD 279
            :        |:.|  :|:..:..| |.|  |::.||             ||:..|........::
 Worm    84 ISKALRLPPLFGC--LALGIIIKNITVFDQFFVFPPFVETMIRKVALVMIIVRWGLATDIHFLYE 146

  Fly   280 NL---GTILLMAVVGTIFNIATIGGSLYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAV 341
            |.   .||.|:..:|.|..: ||..          |.......:|.:|....|::....|.|.|:
 Worm   147 NALMPVTIGLVTAIGEIIAV-TIAS----------YFILNISFVMSIFCALILVTVSPAVTVPAM 200

  Fly   342 --FEEIHVNEILYIVVFGESLL-----NDAVTVVMYHMMESYNEIGLDKIIAQDIASGVGSFFVV 399
              |:|..:..:..|   .|::|     ::...|:::.::.|.  |..|..||..|....||....
 Worm   201 INFKEKQLGSLKRI---PENILAICCVDNLFCVILFMVLSSI--IFTDAPIATTILLNAGSIVFG 260

  Fly   400 ALGGTAIG-IIWGFLTGLV--TRFTDHVRVIEPIFIFVM--AYLAYLNAEIFHMSGILAITFCGI 459
            .:||..:| |:|.|.....  |:|. .:.::..|.|.|:  .||..     :..||.||......
 Worm   261 CIGGIVLGWILWRFPRSDAPHTQFA-RITLLGTICIAVVIGTYLIK-----YSCSGFLAALITSA 319

  Fly   460 TMKNYVESNISQK---SHTTVKYALKMLSSSAETIIFMFLGVATVNNMHVWNTWFV-VLTIAFCS 520
            ......:::..:|   ..:|.||   :..|.|..::|:.||:....:...|...|: :..||...
 Worm   320 MSAMQWKADNKEKLECVESTYKY---IWDSFALPLLFICLGMKFDCSTLTWEIVFLCIAVIAIGL 381

  Fly   521 VFRVIGVILLSALANRFRLHKLSRVDQFVMSYGGLRGAVAFALVLLVD--ENVVKQKNMFVTTTI 583
            :.|.| :::|..|::.....:...|...::.....:..:|..|:|:..  .::.|...:.:...|
 Worm   382 LVRTI-LVMLVTLSSHINFKEQIVVALSLLPRATFQADLAPTLLLMATPFPDMAKDAALILKAAI 445

  Fly   584 AVIYFTVFLQGITIKPLVKILNVKRANKRKPTMNERIHERFMDHLMAGIEDIVGKTGNYNVRDKF 648
            ..:..|..:..|    |:.::..|..::..|.....|.:.|....|.|  |.|.:|         
 Worm   446 LSVLITAPIFDI----LLNLVGSKCLSQYNPQDAPAIEKNFDKTYMNG--DHVDET--------- 495

  Fly   649 KRFDNRFIRPLLIRDLKGAEPKIIETYSKLTMRDAME 685
                           :..|.||   |||:......:|
 Worm   496 ---------------IYAARPK---TYSEYRSEAVIE 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 112/557 (20%)
Na_H_Exchanger 199..602 CDD:279355 95/466 (20%)
slc-9B.1NP_509724.1 Na_H_Exchanger 68..455 CDD:382399 87/418 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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