DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nhe2 and nhx-2

DIOPT Version :9

Sequence 1:NP_001137851.1 Gene:Nhe2 / 35376 FlyBaseID:FBgn0040297 Length:1322 Species:Drosophila melanogaster
Sequence 2:NP_495614.4 Gene:nhx-2 / 174242 WormBaseID:WBGene00003730 Length:644 Species:Caenorhabditis elegans


Alignment Length:617 Identity:252/617 - (40%)
Similarity:386/617 - (62%) Gaps:31/617 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 DEGHKMERYPLSSVDFARVKTPFIIGIWILSASIAKIGFHMTPKLHLIFPESCLLIVVGVVIGVV 239
            :|.....|||::..::..||.|..|.:|::.||||||.|::.|.|:.:||:|.|||::|::||::
 Worm    28 EEKEYPSRYPIAYFEWENVKIPMTICLWLIGASIAKIIFNLIPHLNELFPDSALLIMIGLIIGII 92

  Fly   240 LYFCTDVAVSP----LTPNTFFFYMLPPIILDAGYFMPNRLFFDNLGTILLMAVVGTIFNIATIG 300
            ...   :.|:.    |....|..|:|||::.|||||||.|.||||.|:||..|::||.|||..|.
 Worm    93 FKL---IGVNKNAFFLESEVFMLYLLPPLVFDAGYFMPARQFFDNFGSILCFAMIGTSFNIVAIA 154

  Fly   301 GSLYACGKMGIYGESETPGLMDVFLFASLISAVDPVAVLAVFEEIHVNEILYIVVFGESLLNDAV 365
            .||:|....|:: ..||| ||.:.||.|:.:.||||||:.:|||:.|||:|:|.|||||||||.|
 Worm   155 LSLWAISLTGLF-SVETP-LMHMLLFGSVAADVDPVAVIVIFEELKVNEVLFIAVFGESLLNDGV 217

  Fly   366 TVVMYHMMESYNEIGLDKIIAQDIASGVGSFFVVALGGTAIGIIWGFLTGLVTRFT--DHVRVIE 428
            .||:|.|..:::|||.:.:|..|..:|..||.|||.||..||:::.|||.|||||.  :.|:|:.
 Worm   218 AVVLYRMFLTFSEIGTENLITSDYINGGVSFLVVAFGGIGIGLLFAFLTSLVTRFARDEEVKVLN 282

  Fly   429 PIFIFVMAYLAYLNAEIFHMSGILAITFCGITMKNYVESNISQKSHTTVKYALKMLSSSAETIIF 493
            .:||.::.|..||..|:|.:|.|:||.|||..|:.|...|:...:....:..:|:||.::||:||
 Worm   283 SVFILILPYTCYLCGELFGLSSIMAIVFCGAAMRQYCRENVDPDTVKATESFIKVLSLASETVIF 347

  Fly   494 MFLGVATVNNMHVWNTWFVVLTIAFCSVFRVIGVILLSALANRFRLHKLSRVDQFVMSYGGLRGA 558
            :|||::||::.|.|:|.|:|||:.||.::|.:||:::....|::||:|.::||||:|:|||||||
 Worm   348 VFLGLSTVSSNHHWDTSFIVLTVVFCLIYRTLGVVVMCYFLNKYRLNKYTKVDQFIMAYGGLRGA 412

  Fly   559 VAFALVLLVDENVVKQKNMFVTTTIAVIYFTVFLQGITIKPLVKILNVKRANKRKPTMNERIHER 623
            :|:.||:.:.: .:..||||||:.|.||||||||||||:||:.:.|.|::.|.....|.|.|:..
 Worm   413 IAYGLVVAIPD-FIPGKNMFVTSCIIVIYFTVFLQGITLKPIAEFLQVEKKNVHSKNMIEHIYSE 476

  Fly   624 FMDHLMAGIEDIVGKTGNYNVRDKFKRFDNRFIRPLLI--RDLKGAE-PKIIETYSKLTMRDAME 685
            .:|..|||:|||.|..|::.:||.:...:|.::||:|:  .::|..: .|::..|..|...||.:
 Worm   477 LIDTTMAGMEDIAGFKGHHWIRDSWNALNNNYLRPILVNKNNMKEMDKTKLVRKYKHLVDEDAKK 541

  Fly   686 VMRRNPSTIGQMTGTESMSALFRNYTNNYIGGSPSLTNLDNT--CSRNLDMAELDYNPSKKDLTD 748
            :.|.:.::  .|..|:::....|:.||..|.|..|.:.:|.|  ...|..:...| :.|...:|.
 Worm   542 IARGDLNS--NMVFTKALIEHTRSRTNTMIDGVSSTSKIDFTKHMKENFGVTVYD-DHSTVPMTP 603

  Fly   749 ARIHHLLAEELKPYRRHRRLSYS-RHAVDDRD 779
            .   ||..|..:       :.|| |..::|.|
 Worm   604 T---HLFQETTE-------VEYSVRSEINDND 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nhe2NP_001137851.1 b_cpa1 189..704 CDD:273294 228/523 (44%)
Na_H_Exchanger 199..602 CDD:279355 195/408 (48%)
nhx-2NP_495614.4 Na_H_Exchanger 103..455 CDD:279355 174/354 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0025
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2218
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000129
OrthoInspector 1 1.000 - - otm14083
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X654
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.820

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